FFCP PHASE1:Hg19::chr2:217540938..217540949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-93bp_to_AF147308_5end | |||
|cluster_id=chr2:217540938..217540949,- | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_42_at_IGFBP5_5end | |||
|id=chr2:217540938..217540949,- | |||
|ontology_enrichment_celltype=CL:0000499!1.76e-09!27;CL:0000153!7.12e-07!9;CL:0000447!7.12e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000327;3.79e-14;15!CL:0000153;1.29e-12;9!CL:0000447;1.29e-12;9!CL:0000197;1.36e-12;6!CL:0000098;1.36e-12;6!CL:0002167;1.36e-12;6!CL:0000499;2.69e-09;28!CL:0000151;2.94e-08;36!CL:0000138;2.65e-07;6!CL:0000214;2.88e-07;3!CL:0000632;4.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,2.81e-14,15;CL:0000197,7.51e-13,6;CL:0000098,7.51e-13,6;CL:0002167,7.51e-13,6;CL:0000153,9.88e-13,9;CL:0000447,9.88e-13,9;CL:0000499,2.32e-09,28;CL:0000151,7.17e-09,36;CL:0000058,2.33e-07,6;CL:0000138,2.33e-07,6;CL:0000214,2.48e-07,3;CL:0000632,3.81e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.41e-14;3!DOID:127;2.41e-14;3!DOID:0060072;7.03e-11;4!DOID:3307;9.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.98e-14,3;DOID:127,2.98e-14,3;DOID:0060072,8.23e-11,4;DOID:3307,3.68e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!8.55e-09!59;UBERON:0000990!8.55e-09!59;UBERON:0007023!2.22e-07!115;UBERON:0003133!7.74e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.92e-08;9!UBERON:0000042;1.92e-08;9!UBERON:0006915;2.88e-07;3!UBERON:0007616;2.88e-07;3!UBERON:0002217;2.88e-07;3!UBERON:0002018;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.03e-08,59;UBERON:0000990,2.03e-08,59;UBERON:0003133,2.33e-07,48;UBERON:0006915,2.48e-07,3;UBERON:0007616,2.48e-07,3;UBERON:0002217,2.48e-07,3;UBERON:0002018,2.48e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,1.78784437770915,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.44846518960824,1.5905718941022,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,1.27159140695737,0,0.309157587715317,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,1.32969058292435,3.12022310734098,0,0,0,1.14382394926518,0.542621605391443,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.63915370872621,1.57702415033935,1.99140405487612,0,0,0,0,0,0.173767228936166,1.17480694477644,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,2.0911009748669,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,2.18147451512753,0.910455840033585,0.262248829918848,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,1.73986598415015,0.55597265731176,0,0,0,0,0,0,0.95460974377781,0,0,0.54907405947211,0,0,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,2.40389234321312,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0,0,0,0,0,2.74439925886963,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,1.00035336054936,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0,0,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,1.4279750469085,0,0,0,0,1.71906176567983,0,0.837847203816763,0,0,0,0.429226048136571,0.223171457441873,0.335917362433631,3.96329871896644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0.5085370753095,1.08599920350743,1.72844298240254,4.24563568142232,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.300515217994437,0,0.406870733204662,1.09109195521536,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,1.41070377476274,4.593682160298,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,1.12815492523886,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,4.46590060550365,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0.647782773655864,0,0.571812353413251,0,0,0.173858272302579,1.60342272946051,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0,0.112131862580613,0.318235791390825,0,0.217716747896961,1.36893320434112,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,0,0.733448665097199,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,1.78784437770915,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.44846518960824,1.5905718941022,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,1.27159140695737,0,0.309157587715317,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,1.32969058292435,3.12022310734098,0,0,0,1.14382394926518,0.542621605391443,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.63915370872621,1.57702415033935,1.99140405487612,0,0,0,0,0,0.173767228936166,1.17480694477644,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,2.0911009748669,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,2.18147451512753,0.910455840033585,0.262248829918848,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,1.73986598415015,0.55597265731176,0,0,0,0,0,0,0.95460974377781,0,0,0.54907405947211,0,0,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,2.40389234321312,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0,0,0,0,0,2.74439925886963,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,1.00035336054936,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0,0,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,1.4279750469085,0,0,0,0,1.71906176567983,0,0.837847203816763,0,0,0,0.429226048136571,0.223171457441873,0.335917362433631,3.96329871896644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0.5085370753095,1.08599920350743,1.72844298240254,4.24563568142232,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.300515217994437,0,0.406870733204662,1.09109195521536,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,1.41070377476274,4.593682160298,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,1.12815492523886,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,4.46590060550365,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0.647782773655864,0,0.571812353413251,0,0,0.173858272302579,1.60342272946051,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0,0.112131862580613,0.318235791390825,0,0.217716747896961,1.36893320434112,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,0,0.733448665097199,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p42@IGFBP5 | |||
}} | }} |
Latest revision as of 07:07, 20 September 2015
Short description: | p42@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_IGFBP5_5end |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | -93bp_to_AF147308_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 2.81e-14 | 15 |
receptor cell | 7.51e-13 | 6 |
sensory epithelial cell | 7.51e-13 | 6 |
olfactory epithelial cell | 7.51e-13 | 6 |
GAG secreting cell | 9.88e-13 | 9 |
carbohydrate secreting cell | 9.88e-13 | 9 |
stromal cell | 2.32e-09 | 28 |
secretory cell | 7.17e-09 | 36 |
chondroblast | 2.33e-07 | 6 |
chondrocyte | 2.33e-07 | 6 |
synovial cell | 2.48e-07 | 3 |
hepatic stellate cell | 3.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 2.03e-08 | 59 |
reproductive system | 2.03e-08 | 59 |
reproductive organ | 2.33e-07 | 48 |
stratified squamous epithelium | 2.48e-07 | 3 |
layer of synovial tissue | 2.48e-07 | 3 |
synovial joint | 2.48e-07 | 3 |
synovial membrane of synovial joint | 2.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.98e-14 | 3 |
leiomyoma | 2.98e-14 | 3 |
benign neoplasm | 8.23e-11 | 4 |
teratoma | 3.68e-10 | 2 |