FFCP PHASE1:Hg19::chr1:207112600..207112616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |EntrezGene=5284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8968 | |HGNC=8968 | ||
|TSSclassifier=strong | |||
|UniProt=P01833 | |UniProt=P01833 | ||
|association_with_transcript=21bp_to_M24559_5end | |association_with_transcript=21bp_to_M24559_5end | ||
|cluster_id=chr1:207112600..207112616,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_10_at_PIGR_5end | |description=CAGE_peak_10_at_PIGR_5end | ||
|id=chr1:207112600..207112616,- | |id=chr1:207112600..207112616,- | ||
|ontology_enrichment_celltype=CL:0002379!6.88e-07!1 | |ontology_enrichment_celltype=CL:0002379!6.88e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.53e-17;1!UBERON:0008801;6.47e-17;1!UBERON:0006242;9.58e-17;1!UBERON:0006595;2.98e-11;86!UBERON:0006965;7.79e-09;2 | |||
|ontology_enrichment_disease=DOID:3620!6.88e-07!1;DOID:3565!6.88e-07!1;DOID:178!7.73e-07!1;DOID:326!7.73e-07!1;DOID:3978!7.73e-07!1;DOID:3394!7.73e-07!1;DOID:5844!7.73e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@PIGR | |short_description=p10@PIGR | ||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p10@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 21bp_to_M24559_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.59e-32 | 2 |
open tracheal system trachea | 7.48e-31 | 2 |
saliva-secreting gland | 6.20e-24 | 6 |
gland of oral region | 6.20e-24 | 6 |
gland of foregut | 6.20e-24 | 6 |
oral gland | 6.20e-24 | 6 |
oral cavity | 6.20e-24 | 6 |
submandibular gland | 5.53e-17 | 1 |
submandibular gland primordium | 5.53e-17 | 1 |
parotid gland | 6.47e-17 | 1 |
cheek | 6.47e-17 | 1 |
parotid gland primordium | 6.47e-17 | 1 |
lower lobe of right lung | 3.07e-16 | 1 |
right lung lobe | 3.07e-16 | 1 |
lower lobe of lung | 3.07e-16 | 1 |
lobe of lung | 3.07e-16 | 1 |
right lung | 3.07e-16 | 1 |
adult organism | 2.98e-15 | 114 |
gland of gut | 1.22e-14 | 10 |
intestine | 5.14e-14 | 17 |
small intestine | 3.03e-13 | 4 |
subdivision of digestive tract | 6.00e-12 | 118 |
digestive system | 1.12e-11 | 145 |
digestive tract | 1.12e-11 | 145 |
primitive gut | 1.12e-11 | 145 |
endoderm-derived structure | 1.73e-10 | 160 |
endoderm | 1.73e-10 | 160 |
presumptive endoderm | 1.73e-10 | 160 |
gastrointestinal system | 8.56e-10 | 25 |
trachea | 1.54e-09 | 7 |
respiratory airway | 1.54e-09 | 7 |
midface | 4.02e-09 | 2 |
throat | 6.42e-09 | 2 |
colon | 7.77e-08 | 9 |
respiratory system | 3.47e-07 | 74 |
oral opening | 5.85e-07 | 22 |