FFCP PHASE1:Hg19::chr1:207112600..207112616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |EntrezGene=5284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8968 | |HGNC=8968 | ||
|TSSclassifier=strong | |||
|UniProt=P01833 | |UniProt=P01833 | ||
|association_with_transcript=21bp_to_M24559_5end | |association_with_transcript=21bp_to_M24559_5end | ||
|cluster_id=chr1:207112600..207112616,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_10_at_PIGR_5end | |description=CAGE_peak_10_at_PIGR_5end | ||
|id=chr1:207112600..207112616,- | |id=chr1:207112600..207112616,- | ||
|ontology_enrichment_celltype=CL:0002379!6.88e-07!1 | |ontology_enrichment_celltype=CL:0002379!6.88e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.53e-17;1!UBERON:0008801;6.47e-17;1!UBERON:0006242;9.58e-17;1!UBERON:0006595;2.98e-11;86!UBERON:0006965;7.79e-09;2 | |||
|ontology_enrichment_disease=DOID:3620!6.88e-07!1;DOID:3565!6.88e-07!1;DOID:178!7.73e-07!1;DOID:326!7.73e-07!1;DOID:3978!7.73e-07!1;DOID:3394!7.73e-07!1;DOID:5844!7.73e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.77e-22!115;UBERON:0001829!2.29e-13!2;UBERON:0003127!6.70e-13!2;UBERON:0000078!2.64e-11!18;UBERON:0004921!8.10e-11!129;UBERON:0004185!8.10e-11!129;UBERON:0001044!8.33e-10!6;UBERON:0003293!8.33e-10!6;UBERON:0003294!8.33e-10!6;UBERON:0010047!8.33e-10!6;UBERON:0000167!8.33e-10!6;UBERON:0000166!1.32e-09!21;UBERON:0001007!1.42e-09!155;UBERON:0001555!1.42e-09!155;UBERON:0007026!1.42e-09!155;UBERON:0001723!1.39e-08!3;UBERON:0001033!1.39e-08!3;UBERON:0010056!1.39e-08!3;UBERON:0006562!1.77e-08!11;UBERON:0004119!1.85e-08!169;UBERON:0000925!1.85e-08!169;UBERON:0006595!1.85e-08!169;UBERON:0001004!8.72e-08!72;UBERON:0001736!1.55e-07!1;UBERON:0006298!1.55e-07!1;UBERON:0001831!1.65e-07!1;UBERON:0001567!1.65e-07!1;UBERON:0008801!1.65e-07!1;UBERON:0002171!3.01e-07!1;UBERON:0006518!3.01e-07!1;UBERON:0008949!3.01e-07!1;UBERON:0000101!3.01e-07!1;UBERON:0002167!3.01e-07!1;UBERON:0000989!3.20e-07!1;UBERON:0008811!3.20e-07!1;UBERON:0006258!3.20e-07!1;UBERON:0005876!3.20e-07!1;UBERON:0004874!3.20e-07!1;UBERON:0001154!3.82e-07!1;UBERON:0001153!3.82e-07!1;UBERON:0000165!4.69e-07!28;UBERON:0000930!4.69e-07!28;UBERON:0002372!6.12e-07!1;UBERON:0001961!6.12e-07!1;UBERON:0001744!6.12e-07!1;UBERON:0001735!6.12e-07!1;UBERON:0006834!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.59e-32;2!UBERON:0003127;7.48e-31;2!UBERON:0001044;6.20e-24;6!UBERON:0003293;6.20e-24;6!UBERON:0003294;6.20e-24;6!UBERON:0010047;6.20e-24;6!UBERON:0003408;6.20e-24;6!UBERON:0000167;6.20e-24;6!UBERON:0004921;1.53e-18;33!UBERON:0001736;5.53e-17;1!UBERON:0001831;6.47e-17;1!UBERON:0001567;6.47e-17;1!UBERON:0002171;2.43e-16;1!UBERON:0006518;2.43e-16;1!UBERON:0008949;2.43e-16;1!UBERON:0000101;2.43e-16;1!UBERON:0002167;2.43e-16;1!UBERON:0000160;5.22e-14;17!UBERON:0002108;3.03e-13;4!UBERON:0005409;4.97e-11;22!UBERON:0001041;1.25e-10;14!UBERON:0003126;1.54e-09;7!UBERON:0001005;1.54e-09;7!UBERON:0001555;1.83e-09;54!UBERON:0004089;4.02e-09;2!UBERON:0000341;6.42e-09;2!UBERON:0000161;5.61e-08;19!UBERON:0000166;5.61e-08;19!UBERON:0001155;7.90e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.59e-32,2;UBERON:0003127,7.48e-31,2;UBERON:0001044,6.20e-24,6;UBERON:0003293,6.20e-24,6;UBERON:0003294,6.20e-24,6;UBERON:0010047,6.20e-24,6;UBERON:0000167,6.20e-24,6;UBERON:0001736,5.53e-17,1;UBERON:0006298,5.53e-17,1;UBERON:0001831,6.47e-17,1;UBERON:0001567,6.47e-17,1;UBERON:0008801,6.47e-17,1;UBERON:0002171,3.07e-16,1;UBERON:0006518,3.07e-16,1;UBERON:0008949,3.07e-16,1;UBERON:0000101,3.07e-16,1;UBERON:0002167,3.07e-16,1;UBERON:0007023,2.98e-15,114;UBERON:0003408,1.22e-14,10;UBERON:0000160,5.14e-14,17;UBERON:0002108,3.03e-13,4;UBERON:0004921,6.00e-12,118;UBERON:0001007,1.12e-11,145;UBERON:0001555,1.12e-11,145;UBERON:0007026,1.12e-11,145;UBERON:0004119,1.73e-10,160;UBERON:0000925,1.73e-10,160;UBERON:0006595,1.73e-10,160;UBERON:0005409,8.56e-10,25;UBERON:0003126,1.54e-09,7;UBERON:0001005,1.54e-09,7;UBERON:0004089,4.02e-09,2;UBERON:0000341,6.42e-09,2;UBERON:0001155,7.77e-08,9;UBERON:0001004,3.47e-07,74;UBERON:0000166,5.85e-07,22 | |||
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|short_description=p10@PIGR | |short_description=p10@PIGR | ||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p10@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 21bp_to_M24559_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.59e-32 | 2 |
open tracheal system trachea | 7.48e-31 | 2 |
saliva-secreting gland | 6.20e-24 | 6 |
gland of oral region | 6.20e-24 | 6 |
gland of foregut | 6.20e-24 | 6 |
oral gland | 6.20e-24 | 6 |
oral cavity | 6.20e-24 | 6 |
submandibular gland | 5.53e-17 | 1 |
submandibular gland primordium | 5.53e-17 | 1 |
parotid gland | 6.47e-17 | 1 |
cheek | 6.47e-17 | 1 |
parotid gland primordium | 6.47e-17 | 1 |
lower lobe of right lung | 3.07e-16 | 1 |
right lung lobe | 3.07e-16 | 1 |
lower lobe of lung | 3.07e-16 | 1 |
lobe of lung | 3.07e-16 | 1 |
right lung | 3.07e-16 | 1 |
adult organism | 2.98e-15 | 114 |
gland of gut | 1.22e-14 | 10 |
intestine | 5.14e-14 | 17 |
small intestine | 3.03e-13 | 4 |
subdivision of digestive tract | 6.00e-12 | 118 |
digestive system | 1.12e-11 | 145 |
digestive tract | 1.12e-11 | 145 |
primitive gut | 1.12e-11 | 145 |
endoderm-derived structure | 1.73e-10 | 160 |
endoderm | 1.73e-10 | 160 |
presumptive endoderm | 1.73e-10 | 160 |
gastrointestinal system | 8.56e-10 | 25 |
trachea | 1.54e-09 | 7 |
respiratory airway | 1.54e-09 | 7 |
midface | 4.02e-09 | 2 |
throat | 6.42e-09 | 2 |
colon | 7.77e-08 | 9 |
respiratory system | 3.47e-07 | 74 |
oral opening | 5.85e-07 | 22 |