FFCP PHASE1:Hg19::chr5:132387675..132387788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3308 | |EntrezGene=3308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5237 | |HGNC=5237 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUK9,F5H3R0,P34932 | |UniProt=Q9BUK9,F5H3R0,P34932 | ||
|association_with_transcript=13bp_to_ENST00000321956,ENST00000537974,NM_002154,uc003kyj.2_5end | |association_with_transcript=13bp_to_ENST00000321956,ENST00000537974,NM_002154,uc003kyj.2_5end | ||
|cluster_id=chr5:132387675..132387788,+ | |||
|description=CAGE_peak_1_at_HSPA4_5end | |description=CAGE_peak_1_at_HSPA4_5end | ||
|id=chr5:132387675..132387788,+ | |id=chr5:132387675..132387788,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.75e-11!248;CL:0000220!7.92e-11!246;CL:0000548!1.70e-10!679;CL:0000004!1.70e-10!679;CL:0000255!1.70e-10!679;CL:0000055!7.00e-10!180;CL:0000012!9.11e-10!682;CL:0000066!3.60e-08!254 | |ontology_enrichment_celltype=CL:0002321!1.75e-11!248;CL:0000220!7.92e-11!246;CL:0000548!1.70e-10!679;CL:0000004!1.70e-10!679;CL:0000255!1.70e-10!679;CL:0000055!7.00e-10!180;CL:0000012!9.11e-10!682;CL:0000066!3.60e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.01e-11,250;CL:0000066,2.61e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.08e-18!239;DOID:162!2.30e-17!235;DOID:0050687!6.22e-10!143;DOID:305!2.33e-08!106;DOID:0050686!7.75e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.08e-18,239;DOID:162,2.30e-17,235;DOID:0050687,6.22e-10,143;DOID:305,2.33e-08,106;DOID:0050686,7.75e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HSPA4 | |short_description=p1@HSPA4 | ||
}} | }} |
Latest revision as of 06:42, 20 September 2015
Short description: | p1@HSPA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSPA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000321956, ENST00000537974, NM_002154, uc003kyj.2_5end |
EntrezGene: | HSPA4 |
HGNC: | 5237 |
UniProt: | Q9BUK9F5H3R0P34932 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.01e-11 | 250 |
epithelial cell | 2.61e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.08e-18 | 239 |
cancer | 2.30e-17 | 235 |
cell type cancer | 6.22e-10 | 143 |
carcinoma | 2.33e-08 | 106 |
organ system cancer | 7.75e-07 | 137 |