FFCP PHASE1:Hg19::chr6:99858802..99858838,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:99858802..99858838,-
|short_description=p11@PNISR
|description=CAGE_peak_11_at_PNISR_5end
|association_with_transcript=29bp_to_ENST00000463021_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000463021_5end | |||
|cluster_id=chr6:99858802..99858838,- | |||
|description=CAGE_peak_11_at_PNISR_5end | |||
|id=chr6:99858802..99858838,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.13e-13!115;UBERON:0001049!3.88e-08!57;UBERON:0005068!3.88e-08!57;UBERON:0006241!3.88e-08!57;UBERON:0007135!3.88e-08!57;UBERON:0001017!1.98e-07!82;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0005743!6.91e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.04e-07;4!UBERON:0010133;1.04e-07;4!UBERON:0006947;6.71e-07;3!UBERON:0004054;6.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-15,114;UBERON:0002346,2.48e-10,86;UBERON:0001049,3.78e-10,56;UBERON:0005068,3.78e-10,56;UBERON:0006241,3.78e-10,56;UBERON:0007135,3.78e-10,56;UBERON:0003075,2.12e-09,82;UBERON:0007284,2.12e-09,82;UBERON:0000073,8.41e-09,53;UBERON:0002616,8.41e-09,53;UBERON:0001017,9.57e-09,81;UBERON:0001016,6.88e-08,89;UBERON:0000955,8.62e-08,68;UBERON:0006238,8.62e-08,68;UBERON:0003296,1.74e-07,4;UBERON:0010133,1.74e-07,4;UBERON:0006947,7.01e-07,3;UBERON:0004054,7.01e-07,3 | |||
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| ||
|short_description=p11@PNISR | |||
}} | }} |
Latest revision as of 06:24, 20 September 2015
Short description: | p11@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PNISR_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000463021_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.64e-15 | 114 |
neurectoderm | 2.48e-10 | 86 |
neural tube | 3.78e-10 | 56 |
neural rod | 3.78e-10 | 56 |
future spinal cord | 3.78e-10 | 56 |
neural keel | 3.78e-10 | 56 |
neural plate | 2.12e-09 | 82 |
presumptive neural plate | 2.12e-09 | 82 |
regional part of nervous system | 8.41e-09 | 53 |
regional part of brain | 8.41e-09 | 53 |
central nervous system | 9.57e-09 | 81 |
nervous system | 6.88e-08 | 89 |
brain | 8.62e-08 | 68 |
future brain | 8.62e-08 | 68 |
gland of diencephalon | 1.74e-07 | 4 |
neuroendocrine gland | 1.74e-07 | 4 |
male genital duct | 7.01e-07 | 3 |
internal male genitalia | 7.01e-07 | 3 |