FFCP PHASE1:Hg19::chr5:132200275..132200284,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2661 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4224 | |||
|TSSclassifier=strong | |||
|UniProt=O60383 | |||
|association_with_transcript=192bp_to_ENST00000296875,NM_005260,uc003kxz.1_5end | |||
|cluster_id=chr5:132200275..132200284,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_GDF9_5end | |||
|id=chr5:132200275..132200284,- | |||
|ontology_enrichment_celltype=CL:0000840!6.23e-17!5;CL:0001029!6.23e-17!5;CL:0002336!1.32e-11!1;CL:0002261!1.32e-11!1;CL:0002170!1.32e-11!1;CL:0000990!1.77e-11!8;CL:0000451!1.74e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.84e-50;5!CL:0000990;8.87e-34;8!CL:0000451;8.12e-28;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.84e-50,5;CL:0001029,3.84e-50,5;CL:0000990,8.87e-34,8;CL:0000451,8.12e-28,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.85e-22!2;UBERON:0002757!1.85e-22!2;UBERON:0010134!1.85e-22!2;UBERON:0002784!1.85e-22!2;UBERON:0005408!1.85e-22!2;UBERON:0001899!1.85e-22!2;UBERON:0003296!1.02e-11!4;UBERON:0010133!1.02e-11!4;UBERON:0002368!2.18e-07!35;UBERON:0001894!4.60e-07!7;UBERON:0006222!4.60e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.13e-66;2!UBERON:0002757;9.13e-66;2!UBERON:0010134;9.13e-66;2!UBERON:0005408;9.13e-66;2!UBERON:0001899;9.13e-66;2!UBERON:0003296;1.50e-33;4!UBERON:0010133;1.50e-33;4!UBERON:0002784;1.50e-33;4!UBERON:0001894;1.09e-19;7!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.73e-66,2;UBERON:0002757,7.73e-66,2;UBERON:0010134,7.73e-66,2;UBERON:0005408,7.73e-66,2;UBERON:0001899,7.73e-66,2;UBERON:0003296,1.38e-33,4;UBERON:0010133,1.38e-33,4;UBERON:0002784,1.38e-33,4;UBERON:0001894,1.04e-19,7;UBERON:0006222,1.04e-19,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,7.83583817846703,5.45127638127347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,2.35398605553177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p2@GDF9 | |||
}} |
Latest revision as of 06:24, 20 September 2015
Short description: | p2@GDF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GDF9_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 192bp_to_ENST00000296875, NM_005260, uc003kxz.1_5end |
EntrezGene: | GDF9 |
HGNC: | 4224 |
UniProt: | O60383 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.84e-50 | 5 |
common dendritic progenitor | 3.84e-50 | 5 |
conventional dendritic cell | 8.87e-34 | 8 |
dendritic cell | 8.12e-28 | 10 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.73e-66 | 2 |
regional part of epithalamus | 7.73e-66 | 2 |
secretory circumventricular organ | 7.73e-66 | 2 |
circumventricular organ | 7.73e-66 | 2 |
epithalamus | 7.73e-66 | 2 |
gland of diencephalon | 1.38e-33 | 4 |
neuroendocrine gland | 1.38e-33 | 4 |
regional part of diencephalon | 1.38e-33 | 4 |
diencephalon | 1.04e-19 | 7 |
future diencephalon | 1.04e-19 | 7 |