FFCP PHASE1:Hg19::chr5:132166509..132166516,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134549 | |EntrezGene=134549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24084 | |HGNC=24084 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M3G4 | |UniProt=Q2M3G4 | ||
|association_with_transcript=73bp_to_ENST00000378679,NM_001172700,uc003kxx.2_5end | |association_with_transcript=73bp_to_ENST00000378679,NM_001172700,uc003kxx.2_5end | ||
|cluster_id=chr5:132166509..132166516,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_7_at_SHROOM1_5end | |description=CAGE_peak_7_at_SHROOM1_5end | ||
|id=chr5:132166509..132166516,- | |id=chr5:132166509..132166516,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.53e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13 | |||
|ontology_enrichment_disease=DOID:305!2.17e-08!106 | |ontology_enrichment_disease=DOID:305!2.17e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.66e-11!115;UBERON:0001049!2.17e-10!57;UBERON:0005068!2.17e-10!57;UBERON:0006241!2.17e-10!57;UBERON:0007135!2.17e-10!57;UBERON:0002616!6.71e-09!59;UBERON:0000955!9.06e-09!69;UBERON:0006238!9.06e-09!69;UBERON:0000062!1.34e-08!511;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0001008!1.78e-08!45;UBERON:0005743!2.38e-08!86;UBERON:0001017!2.75e-08!82;UBERON:0003080!5.00e-08!42;UBERON:0002346!8.29e-08!90;UBERON:0006554!1.22e-07!44;UBERON:0005172!1.26e-07!55;UBERON:0005173!1.26e-07!55;UBERON:0000033!1.66e-07!123;UBERON:0002780!3.23e-07!41;UBERON:0001890!3.23e-07!41;UBERON:0006240!3.23e-07!41;UBERON:0001893!3.85e-07!34;UBERON:0000923!7.03e-07!604;UBERON:0005291!7.03e-07!604;UBERON:0006598!7.03e-07!604;UBERON:0002532!7.03e-07!604;UBERON:0000073!7.93e-07!94;UBERON:0001016!7.93e-07!94;UBERON:0002050!8.06e-07!605;UBERON:0005423!8.06e-07!605;UBERON:0003056!8.33e-07!61;UBERON:0000153!9.99e-07!129;UBERON:0007811!9.99e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!4.66e-11!115;UBERON:0001049!2.17e-10!57;UBERON:0005068!2.17e-10!57;UBERON:0006241!2.17e-10!57;UBERON:0007135!2.17e-10!57;UBERON:0002616!6.71e-09!59;UBERON:0000955!9.06e-09!69;UBERON:0006238!9.06e-09!69;UBERON:0000062!1.34e-08!511;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0001008!1.78e-08!45;UBERON:0005743!2.38e-08!86;UBERON:0001017!2.75e-08!82;UBERON:0003080!5.00e-08!42;UBERON:0002346!8.29e-08!90;UBERON:0006554!1.22e-07!44;UBERON:0005172!1.26e-07!55;UBERON:0005173!1.26e-07!55;UBERON:0000033!1.66e-07!123;UBERON:0002780!3.23e-07!41;UBERON:0001890!3.23e-07!41;UBERON:0006240!3.23e-07!41;UBERON:0001893!3.85e-07!34;UBERON:0000923!7.03e-07!604;UBERON:0005291!7.03e-07!604;UBERON:0006598!7.03e-07!604;UBERON:0002532!7.03e-07!604;UBERON:0000073!7.93e-07!94;UBERON:0001016!7.93e-07!94;UBERON:0002050!8.06e-07!605;UBERON:0005423!8.06e-07!605;UBERON:0003056!8.33e-07!61;UBERON:0000153!9.99e-07!129;UBERON:0007811!9.99e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.16e-29;1!UBERON:0000996;3.16e-29;1!UBERON:0011215;3.16e-29;1!UBERON:0001018;3.16e-29;1!UBERON:0002473;3.16e-29;1!UBERON:0005340;3.16e-29;1!UBERON:0003544;3.16e-29;1!UBERON:0005970;3.16e-29;1!UBERON:0002316;3.16e-29;1!UBERON:0001020;3.16e-29;1!UBERON:0002437;3.16e-29;1!UBERON:0002107;2.05e-24;19!UBERON:0006925;2.05e-24;19!UBERON:0002423;1.04e-18;25!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0002365;4.76e-15;31!UBERON:0002330;4.76e-15;31!UBERON:0002368;1.15e-12;33!UBERON:0000949;1.46e-09;43!UBERON:0005172;6.54e-07;52!UBERON:0005173;6.54e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.37e-29,1;UBERON:0002336,4.20e-29,1;UBERON:0011215,4.20e-29,1;UBERON:0001018,4.20e-29,1;UBERON:0002473,4.20e-29,1;UBERON:0005340,4.20e-29,1;UBERON:0003544,4.20e-29,1;UBERON:0005970,4.20e-29,1;UBERON:0002316,4.20e-29,1;UBERON:0001020,4.20e-29,1;UBERON:0002437,4.20e-29,1;UBERON:0002107,2.05e-24,19;UBERON:0006925,2.05e-24,19;UBERON:0008836,2.05e-24,19;UBERON:0008835,3.56e-21,22;UBERON:0003894,3.56e-21,22;UBERON:0009854,2.78e-20,23;UBERON:0007499,1.04e-18,25;UBERON:0009497,1.04e-18,25;UBERON:0000015,1.04e-18,25;UBERON:0002423,1.04e-18,25;UBERON:0006235,1.04e-18,25;UBERON:0004161,1.04e-18,25;UBERON:0009856,5.17e-18,26;UBERON:0005162,2.74e-15,2;UBERON:0000122,2.74e-15,2;UBERON:0002365,3.35e-15,31;UBERON:0002330,3.35e-15,31;UBERON:0002368,1.58e-13,35;UBERON:0000949,1.24e-10,45;UBERON:0003929,6.15e-09,54;UBERON:0005172,6.15e-09,54;UBERON:0005173,6.15e-09,54;UBERON:0004921,8.24e-09,118;UBERON:0002530,3.24e-08,59;UBERON:0002417,4.37e-08,60;UBERON:0000916,4.37e-08,60;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
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|short_description=p7@SHROOM1 | |short_description=p7@SHROOM1 | ||
}} | }} |
Latest revision as of 06:23, 20 September 2015
Short description: | p7@SHROOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SHROOM1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 73bp_to_ENST00000378679, NM_001172700, uc003kxx.2_5end |
EntrezGene: | SHROOM1 |
HGNC: | 24084 |
UniProt: | Q2M3G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.53e-10 | 12 |