FFCP PHASE1:Hg19::chr6:99849347..99849412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |UniProt=Q8TF01 | ||
|association_with_transcript=-33bp_to_AL080186_5end | |association_with_transcript=-33bp_to_AL080186_5end | ||
|cluster_id=chr6:99849347..99849412,- | |||
|coexpression_cluster_id=C905 | |||
|description=CAGE_peak_4_at_PNISR_5end | |description=CAGE_peak_4_at_PNISR_5end | ||
|id=chr6:99849347..99849412,- | |id=chr6:99849347..99849412,- | ||
|ontology_enrichment_celltype=CL:0000542!6.31e-07!53;CL:0000051!6.31e-07!53 | |ontology_enrichment_celltype=CL:0000542!6.31e-07!53;CL:0000051!6.31e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.13e-08,53;CL:0000051,2.13e-08,53;CL:0000838,6.04e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.58e-15!235;DOID:14566!1.61e-14!239;DOID:0050687!2.10e-09!143;DOID:2531!6.39e-07!51;DOID:0060083!6.39e-07!51;DOID:0050686!8.06e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.32e-09,235;DOID:14566,7.38e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.39e-10!57;UBERON:0005068!9.39e-10!57;UBERON:0006241!9.39e-10!57;UBERON:0007135!9.39e-10!57;UBERON:0002780!5.91e-09!41;UBERON:0001890!5.91e-09!41;UBERON:0006240!5.91e-09!41;UBERON:0001017!1.09e-08!82;UBERON:0002020!2.32e-08!34;UBERON:0003528!2.32e-08!34;UBERON:0003080!2.78e-08!42;UBERON:0005743!7.29e-08!86;UBERON:0000073!9.78e-08!94;UBERON:0001016!9.78e-08!94;UBERON:0000955!1.18e-07!69;UBERON:0006238!1.18e-07!69;UBERON:0002616!2.74e-07!59;UBERON:0002791!3.70e-07!33;UBERON:0002346!4.28e-07!90;UBERON:0001893!5.32e-07!34;UBERON:0001869!8.21e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!9.39e-10!57;UBERON:0005068!9.39e-10!57;UBERON:0006241!9.39e-10!57;UBERON:0007135!9.39e-10!57;UBERON:0002780!5.91e-09!41;UBERON:0001890!5.91e-09!41;UBERON:0006240!5.91e-09!41;UBERON:0001017!1.09e-08!82;UBERON:0002020!2.32e-08!34;UBERON:0003528!2.32e-08!34;UBERON:0003080!2.78e-08!42;UBERON:0005743!7.29e-08!86;UBERON:0000073!9.78e-08!94;UBERON:0001016!9.78e-08!94;UBERON:0000955!1.18e-07!69;UBERON:0006238!1.18e-07!69;UBERON:0002616!2.74e-07!59;UBERON:0002791!3.70e-07!33;UBERON:0002346!4.28e-07!90;UBERON:0001893!5.32e-07!34;UBERON:0001869!8.21e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.61e-08;34!UBERON:0002020;1.61e-08;34!UBERON:0002791;5.44e-08;32!UBERON:0002780;1.79e-07;41!UBERON:0001890;1.79e-07;41!UBERON:0000956;2.63e-07;25!UBERON:0000203;2.63e-07;25!UBERON:0000073;3.18e-07;53!UBERON:0002616;3.18e-07;53!UBERON:0001869;5.29e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.82e-12,56;UBERON:0005068,5.82e-12,56;UBERON:0006241,5.82e-12,56;UBERON:0007135,5.82e-12,56;UBERON:0000073,6.23e-11,53;UBERON:0002616,6.23e-11,53;UBERON:0001017,1.42e-10,81;UBERON:0001016,2.60e-10,89;UBERON:0003528,1.01e-09,34;UBERON:0002020,1.01e-09,34;UBERON:0002780,1.31e-09,41;UBERON:0001890,1.31e-09,41;UBERON:0003080,1.31e-09,41;UBERON:0006240,1.31e-09,41;UBERON:0000955,2.22e-09,68;UBERON:0006238,2.22e-09,68;UBERON:0002791,1.13e-08,32;UBERON:0002346,1.19e-08,86;UBERON:0001893,1.22e-07,34;UBERON:0001869,1.64e-07,32;UBERON:0003075,2.32e-07,82;UBERON:0007284,2.32e-07,82;UBERON:0000956,4.39e-07,25;UBERON:0000203,4.39e-07,25 | |||
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| ||
|short_description=p4@PNISR | |short_description=p4@PNISR | ||
}} | }} |
Latest revision as of 06:21, 20 September 2015
Short description: | p4@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PNISR_5end |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | -33bp_to_AL080186_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.13e-08 | 53 |
common lymphoid progenitor | 2.13e-08 | 53 |
lymphoid lineage restricted progenitor cell | 6.04e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.82e-12 | 56 |
neural rod | 5.82e-12 | 56 |
future spinal cord | 5.82e-12 | 56 |
neural keel | 5.82e-12 | 56 |
regional part of nervous system | 6.23e-11 | 53 |
regional part of brain | 6.23e-11 | 53 |
central nervous system | 1.42e-10 | 81 |
nervous system | 2.60e-10 | 89 |
brain grey matter | 1.01e-09 | 34 |
gray matter | 1.01e-09 | 34 |
regional part of forebrain | 1.31e-09 | 41 |
forebrain | 1.31e-09 | 41 |
anterior neural tube | 1.31e-09 | 41 |
future forebrain | 1.31e-09 | 41 |
brain | 2.22e-09 | 68 |
future brain | 2.22e-09 | 68 |
regional part of telencephalon | 1.13e-08 | 32 |
neurectoderm | 1.19e-08 | 86 |
telencephalon | 1.22e-07 | 34 |
cerebral hemisphere | 1.64e-07 | 32 |
neural plate | 2.32e-07 | 82 |
presumptive neural plate | 2.32e-07 | 82 |
cerebral cortex | 4.39e-07 | 25 |
pallium | 4.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.32e-09 | 235 |
disease of cellular proliferation | 7.38e-09 | 239 |