FFCP PHASE1:Hg19::chr16:11439269..11439278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116028 | |EntrezGene=116028 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28349 | |HGNC=28349 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E14 | |UniProt=Q96E14 | ||
|association_with_transcript=-9bp_to_ENST00000312499_5end | |association_with_transcript=-9bp_to_ENST00000312499_5end | ||
|cluster_id=chr16:11439269..11439278,+ | |||
|description=CAGE_peak_2_at_RMI2_5end | |description=CAGE_peak_2_at_RMI2_5end | ||
|id=chr16:11439269..11439278,+ | |id=chr16:11439269..11439278,+ | ||
|ontology_enrichment_celltype=CL:0000333!5.26e-10!41;CL:0000221!1.10e-07!71;CL:0000133!6.27e-07!59 | |ontology_enrichment_celltype=CL:0000333!5.26e-10!41;CL:0000221!1.10e-07!71;CL:0000133!6.27e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.02e-31;5!CL:0002321;7.89e-16;15!CL:0000148;1.44e-15;10!CL:0002077;3.15e-12;34!CL:0002032;2.79e-11;1!CL:0000557;2.79e-11;1!CL:0000147;3.50e-11;14!CL:0000785;7.81e-11;1!CL:0000222;7.81e-11;1!CL:0002553;7.81e-11;1!CL:0000819;7.81e-11;1!CL:0000312;1.59e-08;5!CL:0000710;7.06e-08;20!CL:0000240;3.05e-07;6!CL:0000311;3.05e-07;6!CL:0000079;3.05e-07;6!CL:0000237;3.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.44e-30,5;CL:0000148,2.90e-15,10;CL:0000541,2.90e-15,10;CL:0002077,7.89e-13,34;CL:0000819,3.76e-11,1;CL:0002553,4.15e-11,1;CL:0000147,5.72e-11,14;CL:0000312,1.66e-08,5;CL:0000710,9.89e-08,20;CL:0000240,3.15e-07,6;CL:0000311,3.15e-07,6;CL:0000079,3.15e-07,6;CL:0000237,3.15e-07,6;CL:0000036,3.15e-07,6;CL:0000357,3.15e-07,6;CL:0000114,3.15e-07,6;CL:0000221,3.76e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;3.05e-07;6!CL:0000114;3.05e-07;6 | |||
|ontology_enrichment_disease=DOID:14566!2.10e-11!239;DOID:162!9.47e-11!235;DOID:0050686!7.00e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.81e-11;1!DOID:8675;7.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.76e-11,1;DOID:8675,3.76e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RMI2 | |short_description=p2@RMI2 | ||
}} | }} |
Latest revision as of 06:15, 20 September 2015
Short description: | p2@RMI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RMI2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000312499_5end |
EntrezGene: | RMI2 |
HGNC: | 28349 |
UniProt: | Q96E14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.44e-30 | 5 |
melanocyte | 2.90e-15 | 10 |
melanoblast | 2.90e-15 | 10 |
ecto-epithelial cell | 7.89e-13 | 34 |
B-1 B cell | 3.76e-11 | 1 |
lung fibroblast | 4.15e-11 | 1 |
pigment cell | 5.72e-11 | 14 |
keratinocyte | 1.66e-08 | 5 |
neurecto-epithelial cell | 9.89e-08 | 20 |
stratified squamous epithelial cell | 3.15e-07 | 6 |
keratin accumulating cell | 3.15e-07 | 6 |
stratified epithelial cell | 3.15e-07 | 6 |
keratinizing barrier epithelial cell | 3.15e-07 | 6 |
epithelial fate stem cell | 3.15e-07 | 6 |
stratified epithelial stem cell | 3.15e-07 | 6 |
surface ectodermal cell | 3.15e-07 | 6 |
ectodermal cell | 3.76e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.76e-11 | 1 |
lymphosarcoma | 3.76e-11 | 1 |