FFCP PHASE1:Hg19::chr12:69979270..69979281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10576 | |EntrezGene=10576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1615 | |HGNC=1615 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQ14 | |UniProt=F8VQ14 | ||
|association_with_transcript=18bp_to_ENST00000550010_5end | |association_with_transcript=18bp_to_ENST00000550010_5end | ||
|cluster_id=chr12:69979270..69979281,+ | |||
|coexpression_cluster_id=C153 | |coexpression_cluster_id=C153 | ||
|description=CAGE_peak_2_at_CCT2_5end | |description=CAGE_peak_2_at_CCT2_5end | ||
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|ontology_enrichment_celltype=CL:0000012!3.22e-25!682;CL:0000548!1.61e-23!679;CL:0000004!1.61e-23!679;CL:0000255!1.61e-23!679;CL:0000003!1.18e-17!722;CL:0000144!2.90e-16!625;CL:0000063!1.10e-13!578;CL:0000034!6.65e-13!444;CL:0000048!3.74e-11!430;CL:0000723!5.25e-11!436;CL:0000037!7.42e-11!172;CL:0000566!7.42e-11!172;CL:0000988!2.46e-10!182;CL:0002032!5.10e-10!165;CL:0000837!5.10e-10!165;CL:0002371!1.96e-08!591;CL:0000219!3.54e-08!390;CL:0000134!1.41e-07!358;CL:0000763!7.32e-07!112;CL:0000049!7.32e-07!112 | |ontology_enrichment_celltype=CL:0000012!3.22e-25!682;CL:0000548!1.61e-23!679;CL:0000004!1.61e-23!679;CL:0000255!1.61e-23!679;CL:0000003!1.18e-17!722;CL:0000144!2.90e-16!625;CL:0000063!1.10e-13!578;CL:0000034!6.65e-13!444;CL:0000048!3.74e-11!430;CL:0000723!5.25e-11!436;CL:0000037!7.42e-11!172;CL:0000566!7.42e-11!172;CL:0000988!2.46e-10!182;CL:0002032!5.10e-10!165;CL:0000837!5.10e-10!165;CL:0002371!1.96e-08!591;CL:0000219!3.54e-08!390;CL:0000134!1.41e-07!358;CL:0000763!7.32e-07!112;CL:0000049!7.32e-07!112 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.51e-13,441;CL:0000048,3.12e-11,427;CL:0000723,4.40e-11,433;CL:0000037,7.18e-11,168;CL:0000988,1.41e-10,177;CL:0002032,4.95e-10,161;CL:0000837,4.95e-10,161;CL:0000219,2.08e-08,386;CL:0000134,8.66e-08,354;CL:0000763,6.63e-07,108;CL:0000049,6.63e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.50e-22!235;DOID:14566!2.86e-22!239;DOID:0050686!1.90e-14!137;DOID:2531!3.74e-11!51;DOID:0060083!3.74e-11!51;DOID:1240!2.33e-08!39;DOID:0050687!4.47e-07!143 | |ontology_enrichment_disease=DOID:162!1.50e-22!235;DOID:14566!2.86e-22!239;DOID:0050686!1.90e-14!137;DOID:2531!3.74e-11!51;DOID:0060083!3.74e-11!51;DOID:1240!2.33e-08!39;DOID:0050687!4.47e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.64e-07;39!DOID:2531;5.75e-07;51!DOID:0060083;5.75e-07;51 | |ontology_enrichment_disease_v019=DOID:1240;5.64e-07;39!DOID:2531;5.75e-07;51!DOID:0060083;5.75e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.38e-22,235;DOID:14566,2.62e-22,239;DOID:0050686,1.77e-14,137;DOID:2531,3.70e-11,51;DOID:0060083,3.70e-11,51;DOID:1240,2.31e-08,39;DOID:0050687,4.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.11e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!4.11e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.59e-07,371 | |||
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| ||
|short_description=p2@CCT2 | |short_description=p2@CCT2 | ||
}} | }} |
Latest revision as of 06:14, 20 September 2015
Short description: | p2@CCT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCT2_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 18bp_to_ENST00000550010_5end |
EntrezGene: | CCT2 |
HGNC: | 1615 |
UniProt: | F8VQ14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.51e-13 | 441 |
multi fate stem cell | 3.12e-11 | 427 |
somatic stem cell | 4.40e-11 | 433 |
hematopoietic stem cell | 7.18e-11 | 168 |
hematopoietic cell | 1.41e-10 | 177 |
hematopoietic oligopotent progenitor cell | 4.95e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.95e-10 | 161 |
motile cell | 2.08e-08 | 386 |
mesenchymal cell | 8.66e-08 | 354 |
myeloid cell | 6.63e-07 | 108 |
common myeloid progenitor | 6.63e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.59e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.38e-22 | 235 |
disease of cellular proliferation | 2.62e-22 | 239 |
organ system cancer | 1.77e-14 | 137 |
hematologic cancer | 3.70e-11 | 51 |
immune system cancer | 3.70e-11 | 51 |
leukemia | 2.31e-08 | 39 |
cell type cancer | 4.27e-07 | 143 |