FFCP PHASE1:Hg19::chr11:75141017..75141039,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75141017..75141039,-
|short_description=p3@KLHL35
|description=CAGE_peak_3_at_KLHL35_5end
|association_with_transcript=67bp_to_ENST00000460787_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283212 | |EntrezGene=283212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26597 | |HGNC=26597 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_ENST00000460787_5end | |||
|cluster_id=chr11:75141017..75141039,- | |||
|coexpression_cluster_id=C2165 | |||
|description=CAGE_peak_3_at_KLHL35_5end | |||
|id=chr11:75141017..75141039,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.42e-21;2!CL:0002563;3.73e-11;4!CL:0000511;4.44e-11;1!CL:0002625;4.44e-11;1!CL:0000216;4.44e-11;1!CL:0002591;4.44e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.70e-21,2;CL:0000511,3.63e-11,1;CL:0002625,3.63e-11,1;CL:0000216,3.63e-11,1;CL:0002591,4.44e-11,1;CL:0002563,4.45e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.07e-11;1!UBERON:0008425;2.07e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.07e-11;1!DOID:326;2.07e-11;1!DOID:3978;2.07e-11;1!DOID:3394;2.07e-11;1!DOID:5844;2.07e-11;1!DOID:4362;4.23e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.97e-11,1;DOID:326,1.97e-11,1;DOID:3978,1.97e-11,1;DOID:3394,1.97e-11,1;DOID:5844,1.97e-11,1;DOID:305,8.32e-10,106;DOID:4362,3.67e-09,5;DOID:0050687,7.75e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.59e-16!34;UBERON:0003528!1.59e-16!34;UBERON:0001869!5.00e-16!32;UBERON:0001893!9.95e-15!34;UBERON:0002791!7.40e-14!33;UBERON:0002619!3.28e-13!22;UBERON:0001950!3.33e-13!20;UBERON:0002780!2.00e-12!41;UBERON:0001890!2.00e-12!41;UBERON:0006240!2.00e-12!41;UBERON:0001049!3.48e-12!57;UBERON:0005068!3.48e-12!57;UBERON:0006241!3.48e-12!57;UBERON:0007135!3.48e-12!57;UBERON:0003080!5.56e-12!42;UBERON:0000956!3.77e-11!25;UBERON:0000203!3.77e-11!25;UBERON:0002616!1.52e-10!59;UBERON:0000200!7.29e-09!6;UBERON:0001017!9.51e-09!82;UBERON:0000955!1.54e-08!69;UBERON:0006238!1.54e-08!69;UBERON:0003075!2.87e-08!86;UBERON:0007284!2.87e-08!86;UBERON:0002346!3.36e-08!90;UBERON:0007023!5.02e-08!115;UBERON:0005743!5.57e-08!86;UBERON:0002308!4.61e-07!9;UBERON:0000125!4.61e-07!9;UBERON:0000473!9.65e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.42e-21;2!UBERON:0004801;2.42e-21;2!UBERON:0000473;1.18e-11;8!UBERON:0001242;3.73e-11;4!UBERON:0001262;3.73e-11;4!UBERON:0004786;3.73e-11;4!UBERON:0004808;3.73e-11;4!UBERON:0001277;3.73e-11;4!UBERON:0001136;4.44e-11;1!UBERON:0001343;4.44e-11;1!UBERON:0004913;4.44e-11;1!UBERON:0003703;4.44e-11;1!UBERON:0004910;4.44e-11;1!UBERON:0004813;4.44e-11;1!UBERON:0001174;4.44e-11;1!UBERON:0004914;4.44e-11;1!UBERON:0000058;1.97e-09;10!UBERON:0003135;1.27e-08;11!UBERON:0000002;1.01e-07;6!UBERON:0001560;1.01e-07;6!UBERON:0003101;1.92e-07;22!UBERON:0000079;1.92e-07;22!UBERON:0005911;3.44e-07;36!UBERON:0000485;9.79e-07;7!UBERON:0003929;9.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.70e-21,2;UBERON:0004801,1.70e-21,2;UBERON:0000473,1.11e-11,8;UBERON:0001136,3.63e-11,1;UBERON:0001343,3.63e-11,1;UBERON:0004910,3.63e-11,1;UBERON:0005154,3.63e-11,1;UBERON:0005295,3.63e-11,1;UBERON:0004813,3.63e-11,1;UBERON:0005297,3.63e-11,1;UBERON:0005294,3.63e-11,1;UBERON:0010141,3.63e-11,1;UBERON:0005891,3.63e-11,1;UBERON:0004913,4.01e-11,1;UBERON:0003703,4.01e-11,1;UBERON:0001174,4.01e-11,1;UBERON:0004914,4.01e-11,1;UBERON:0001242,4.45e-11,4;UBERON:0001262,4.45e-11,4;UBERON:0004786,4.45e-11,4;UBERON:0004808,4.45e-11,4;UBERON:0001277,4.45e-11,4;UBERON:0000485,1.43e-10,9;UBERON:0003135,1.22e-08,11;UBERON:0000002,8.95e-08,6;UBERON:0001560,8.95e-08,6;UBERON:0003101,1.87e-07,22;UBERON:0000079,1.87e-07,22;UBERON:0005911,8.22e-07,82 | |||
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| ||
|short_description=p3@KLHL35 | |||
}} | }} |
Latest revision as of 06:12, 20 September 2015
Short description: | p3@KLHL35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLHL35_5end |
Coexpression cluster: | C2165_mesothelioma_adenocarcinoma_epidermoid_breast_colon_argyrophil_Prostate |
Association with transcript: | 67bp_to_ENST00000460787_5end |
EntrezGene: | KLHL35 |
HGNC: | 26597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.70e-21 | 2 |
androgen binding protein secreting cell | 3.63e-11 | 1 |
seminiferous tubule epithelial cell | 3.63e-11 | 1 |
Sertoli cell | 3.63e-11 | 1 |
smooth muscle cell of the pulmonary artery | 4.44e-11 | 1 |
intestinal epithelial cell | 4.45e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.70e-21 | 2 |
cervix epithelium | 1.70e-21 | 2 |
testis | 1.11e-11 | 8 |
mesothelium | 3.63e-11 | 1 |
seminiferous tubule of testis | 3.63e-11 | 1 |
epithelium of male gonad | 3.63e-11 | 1 |
epithelial cord | 3.63e-11 | 1 |
sex cord | 3.63e-11 | 1 |
seminiferous tubule epithelium | 3.63e-11 | 1 |
testis sex cord | 3.63e-11 | 1 |
genital ridge | 3.63e-11 | 1 |
primitive sex cord of indifferent gonad | 3.63e-11 | 1 |
coelomic epithelium | 3.63e-11 | 1 |
hepatopancreatic ampulla | 4.01e-11 | 1 |
extrahepatic bile duct | 4.01e-11 | 1 |
common bile duct | 4.01e-11 | 1 |
duodenal papilla | 4.01e-11 | 1 |
intestinal mucosa | 4.45e-11 | 4 |
wall of intestine | 4.45e-11 | 4 |
gastrointestinal system mucosa | 4.45e-11 | 4 |
gastrointestinal system epithelium | 4.45e-11 | 4 |
intestinal epithelium | 4.45e-11 | 4 |
simple columnar epithelium | 1.43e-10 | 9 |
male reproductive organ | 1.22e-08 | 11 |
uterine cervix | 8.95e-08 | 6 |
neck of organ | 8.95e-08 | 6 |
male organism | 1.87e-07 | 22 |
male reproductive system | 1.87e-07 | 22 |
endo-epithelium | 8.22e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.97e-11 | 1 |
ischemia | 1.97e-11 | 1 |
extrinsic cardiomyopathy | 1.97e-11 | 1 |
myocardial ischemia | 1.97e-11 | 1 |
myocardial infarction | 1.97e-11 | 1 |
carcinoma | 8.32e-10 | 106 |
cervical cancer | 3.67e-09 | 5 |
cell type cancer | 7.75e-07 | 143 |