FFCP PHASE1:Hg19::chr10:98666877..98666913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84458 | |EntrezGene=84458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29503 | |HGNC=29503 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-128bp_to_ENST00000493486_5end | |||
|cluster_id=chr10:98666877..98666913,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_16_at_LCOR_5end | |||
|id=chr10:98666877..98666913,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.40e-09!24;CL:0000826!1.40e-09!24;CL:0000946!4.07e-08!1;CL:0000786!4.07e-08!1;CL:0000980!4.07e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.02e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000838,1.10e-07,52;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.96e-14;3!UBERON:0003057;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.77e-28!57;UBERON:0005068!1.77e-28!57;UBERON:0006241!1.77e-28!57;UBERON:0007135!1.77e-28!57;UBERON:0002616!5.27e-24!59;UBERON:0002346!1.37e-21!90;UBERON:0001017!4.45e-21!82;UBERON:0003075!3.16e-20!86;UBERON:0007284!3.16e-20!86;UBERON:0005743!5.91e-20!86;UBERON:0002020!6.87e-20!34;UBERON:0003528!6.87e-20!34;UBERON:0001893!7.57e-20!34;UBERON:0000955!8.61e-20!69;UBERON:0006238!8.61e-20!69;UBERON:0002780!1.71e-19!41;UBERON:0001890!1.71e-19!41;UBERON:0006240!1.71e-19!41;UBERON:0003080!5.47e-19!42;UBERON:0000073!9.09e-18!94;UBERON:0001016!9.09e-18!94;UBERON:0001869!1.97e-17!32;UBERON:0002791!6.21e-17!33;UBERON:0002619!1.41e-16!22;UBERON:0007023!2.41e-16!115;UBERON:0000956!1.55e-14!25;UBERON:0000203!1.55e-14!25;UBERON:0001950!6.28e-14!20;UBERON:0002298!3.75e-13!8;UBERON:0001871!6.42e-13!7;UBERON:0003056!1.72e-12!61;UBERON:0003076!7.64e-11!15;UBERON:0003057!7.64e-11!15;UBERON:0000200!4.15e-10!6;UBERON:0000033!7.15e-10!123;UBERON:0001896!8.91e-10!3;UBERON:0005290!8.91e-10!3;UBERON:0010096!8.91e-10!3;UBERON:0002771!1.44e-09!3;UBERON:0006331!2.12e-09!3;UBERON:0000924!2.50e-09!173;UBERON:0006601!2.50e-09!173;UBERON:0000153!2.82e-09!129;UBERON:0007811!2.82e-09!129;UBERON:0004733!6.51e-09!12;UBERON:0002028!6.51e-09!12;UBERON:0007277!6.51e-09!12;UBERON:0004121!1.87e-08!169;UBERON:0004732!3.10e-08!13;UBERON:0002038!1.04e-07!1;UBERON:0009661!1.04e-07!1;UBERON:0002902!1.54e-07!1;UBERON:0009899!1.54e-07!1;UBERON:0007190!1.75e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0002420!7.57e-07!9;UBERON:0007245!7.57e-07!9;UBERON:0010009!7.57e-07!9;UBERON:0010011!7.57e-07!9;UBERON:0000454!7.57e-07!9;UBERON:0002308!7.72e-07!9;UBERON:0000125!7.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.96e-14;3!UBERON:0002240;1.96e-14;3!UBERON:0005174;1.96e-14;3!UBERON:0005290;1.96e-14;3!UBERON:0001137;1.96e-14;3!UBERON:0002298;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.83e-14,3;UBERON:0005174,1.83e-14,3;UBERON:0001137,1.83e-14,3;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0003076,1.58e-11,15;UBERON:0003057,1.58e-11,15;UBERON:0002298,7.25e-08,6 | |||
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|short_description=p16@LCOR | |||
}} | }} |
Latest revision as of 06:03, 20 September 2015
Short description: | p16@LCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LCOR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -128bp_to_ENST00000493486_5end |
EntrezGene: | LCOR |
HGNC: | 29503 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.83e-14 | 3 |
dorsal region element | 1.83e-14 | 3 |
dorsum | 1.83e-14 | 3 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
posterior neural tube | 1.58e-11 | 15 |
chordal neural plate | 1.58e-11 | 15 |
brainstem | 7.25e-08 | 6 |