FFCP PHASE1:Hg19::chr12:69753448..69753577,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:69753448..69753577,+
|short_description=p1@YEATS4
|description=CAGE_peak_1_at_YEATS4_5end
|association_with_transcript=0bp_to_ENST00000247843,ENST00000548...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8089 | |EntrezGene=8089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24859 | |HGNC=24859 | ||
|TSSclassifier=strong | |||
|UniProt=O95619,F8W0J4,F8VTR4,F8W1B9 | |UniProt=O95619,F8W0J4,F8VTR4,F8W1B9 | ||
|association_with_transcript=0bp_to_ENST00000247843,ENST00000548020,ENST00000549685,ENST00000552949,ENST00000552955,NM_006530,uc001sux.2_5end | |||
|cluster_id=chr12:69753448..69753577,+ | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_1_at_YEATS4_5end | |||
|id=chr12:69753448..69753577,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.80e-15!53;CL:0000051!3.80e-15!53;CL:0000838!6.23e-15!52;CL:0000084!1.34e-08!25;CL:0000827!1.34e-08!25;CL:0000066!9.23e-08!254;CL:0000945!4.55e-07!24;CL:0000826!4.55e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.16e-09;53!CL:0000084;1.53e-08;25!CL:0000945;3.99e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.80e-15,53;CL:0000051,3.80e-15,53;CL:0000838,6.23e-15,52;CL:0000084,1.34e-08,25;CL:0000827,1.34e-08,25;CL:0000066,4.77e-08,253;CL:0000945,4.55e-07,24;CL:0000826,4.55e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;3.16e-09;53 | |||
|ontology_enrichment_disease=DOID:162!6.74e-46!235;DOID:14566!9.85e-45!239;DOID:0050687!7.66e-27!143;DOID:0050686!9.65e-24!137;DOID:305!1.86e-22!106;DOID:2531!4.93e-19!51;DOID:0060083!4.93e-19!51;DOID:1240!2.71e-15!39;DOID:8692!5.61e-12!31;DOID:3095!5.49e-08!22;DOID:2994!5.49e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.34e-12;51!DOID:0060083;4.34e-12;51!DOID:1240;5.08e-12;39!DOID:8692;1.06e-11;31!DOID:3095;5.24e-08;22!DOID:2994;5.24e-08;22!DOID:305;6.19e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.74e-46,235;DOID:14566,9.85e-45,239;DOID:0050687,7.66e-27,143;DOID:0050686,9.65e-24,137;DOID:305,1.86e-22,106;DOID:2531,4.93e-19,51;DOID:0060083,4.93e-19,51;DOID:1240,2.71e-15,39;DOID:8692,5.61e-12,31;DOID:3095,5.49e-08,22;DOID:2994,5.49e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@YEATS4 | |||
}} | }} |
Latest revision as of 05:52, 20 September 2015
Short description: | p1@YEATS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YEATS4_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000247843, ENST00000548020, ENST00000549685, ENST00000552949, ENST00000552955, NM_006530, uc001sux.2_5end |
EntrezGene: | YEATS4 |
HGNC: | 24859 |
UniProt: | O95619F8W0J4F8VTR4F8W1B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.80e-15 | 53 |
common lymphoid progenitor | 3.80e-15 | 53 |
lymphoid lineage restricted progenitor cell | 6.23e-15 | 52 |
T cell | 1.34e-08 | 25 |
pro-T cell | 1.34e-08 | 25 |
epithelial cell | 4.77e-08 | 253 |
lymphocyte of B lineage | 4.55e-07 | 24 |
pro-B cell | 4.55e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.74e-46 | 235 |
disease of cellular proliferation | 9.85e-45 | 239 |
cell type cancer | 7.66e-27 | 143 |
organ system cancer | 9.65e-24 | 137 |
carcinoma | 1.86e-22 | 106 |
hematologic cancer | 4.93e-19 | 51 |
immune system cancer | 4.93e-19 | 51 |
leukemia | 2.71e-15 | 39 |
myeloid leukemia | 5.61e-12 | 31 |
germ cell and embryonal cancer | 5.49e-08 | 22 |
germ cell cancer | 5.49e-08 | 22 |