FFCP PHASE1:Hg19::chr20:1638395..1638407,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:1638395..1638407,-
|short_description=p2@SIRPG
|description=CAGE_peak_2_at_SIRPG_5end
|association_with_transcript=0bp_to_ENST00000344103_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55423 | |EntrezGene=55423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15757 | |HGNC=15757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000344103_5end | |||
|cluster_id=chr20:1638395..1638407,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_SIRPG_5end | |||
|id=chr20:1638395..1638407,- | |||
|ontology_enrichment_celltype=CL:0000084!1.08e-29!25;CL:0000827!1.08e-29!25;CL:0000791!1.51e-29!18;CL:0000789!1.51e-29!18;CL:0002420!1.51e-29!18;CL:0002419!1.51e-29!18;CL:0000790!1.51e-29!18;CL:0000838!7.97e-19!52;CL:0000625!8.34e-19!11;CL:0000542!2.66e-18!53;CL:0000051!2.66e-18!53;CL:0000738!1.42e-13!140;CL:0002087!1.03e-12!119;CL:0000624!3.78e-11!6;CL:0000037!1.78e-10!172;CL:0000566!1.78e-10!172;CL:0002031!4.45e-10!124;CL:0000988!3.32e-09!182;CL:0002032!1.00e-08!165;CL:0000837!1.00e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.05e-47;18!CL:0000789;1.05e-47;18!CL:0002419;1.05e-47;18!CL:0000084;6.21e-46;25!CL:0000625;2.92e-33;11!CL:0000624;4.56e-19;6!CL:0000542;1.19e-14;53!CL:0000898;8.29e-11;3!CL:0000226;1.04e-09;3!CL:0000842;1.04e-09;3!CL:0000623;3.82e-09;3!CL:0000815;9.11e-08;2!CL:0000792;9.11e-08;2!CL:0002677;9.11e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.75e-48,18;CL:0000789,9.75e-48,18;CL:0002420,9.75e-48,18;CL:0002419,9.75e-48,18;CL:0000790,9.75e-48,18;CL:0000084,5.99e-46,25;CL:0000827,5.99e-46,25;CL:0000625,3.17e-33,11;CL:0000838,1.48e-28,52;CL:0000542,6.77e-28,53;CL:0000051,6.77e-28,53;CL:0000624,3.89e-19,6;CL:0002087,9.19e-14,115;CL:0000738,1.37e-11,136;CL:0000898,8.03e-11,3;CL:0002031,9.85e-10,120;CL:0000226,1.18e-09,3;CL:0000842,1.18e-09,3;CL:0000623,3.82e-09,3;CL:0000825,3.82e-09,3;CL:0000037,4.14e-08,168;CL:0000815,9.58e-08,2;CL:0000792,9.58e-08,2;CL:0002677,9.58e-08,2;CL:0000988,2.27e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.05e-47;18!CL:0000051;1.19e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.84e-14!15;UBERON:0000179!1.84e-14!15;UBERON:0000463!1.84e-14!15;UBERON:0004177!2.85e-11!7;UBERON:0002370!9.62e-08!4;UBERON:0005058!9.62e-08!4;UBERON:0009113!9.62e-08!4;UBERON:0003295!9.62e-08!4;UBERON:0005562!9.62e-08!4;UBERON:0007023!7.25e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.07e-22;15!UBERON:0000179;4.07e-22;15!UBERON:0000463;4.07e-22;15!UBERON:0002390;5.52e-14;32!UBERON:0002193;2.35e-10;42!UBERON:0002370;1.20e-07;2!UBERON:0005058;1.20e-07;2!UBERON:0009113;1.20e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-22,15;UBERON:0000179,3.35e-22,15;UBERON:0000463,3.35e-22,15;UBERON:0002370,4.02e-08,4;UBERON:0005058,4.02e-08,4;UBERON:0009113,4.02e-08,4;UBERON:0003295,4.02e-08,4;UBERON:0005562,4.02e-08,4;UBERON:0004177,1.66e-07,7;UBERON:0005057,1.66e-07,7 | |||
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| ||
|short_description=p2@SIRPG | |||
}} | }} |
Latest revision as of 05:48, 20 September 2015
Short description: | p2@SIRPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIRPG_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000344103_5end |
EntrezGene: | SIRPG |
HGNC: | 15757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.75e-48 | 18 |
alpha-beta T cell | 9.75e-48 | 18 |
immature T cell | 9.75e-48 | 18 |
mature T cell | 9.75e-48 | 18 |
immature alpha-beta T cell | 9.75e-48 | 18 |
T cell | 5.99e-46 | 25 |
pro-T cell | 5.99e-46 | 25 |
CD8-positive, alpha-beta T cell | 3.17e-33 | 11 |
lymphoid lineage restricted progenitor cell | 1.48e-28 | 52 |
lymphocyte | 6.77e-28 | 53 |
common lymphoid progenitor | 6.77e-28 | 53 |
CD4-positive, alpha-beta T cell | 3.89e-19 | 6 |
nongranular leukocyte | 9.19e-14 | 115 |
leukocyte | 1.37e-11 | 136 |
naive T cell | 8.03e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 9.85e-10 | 120 |
single nucleate cell | 1.18e-09 | 3 |
mononuclear cell | 1.18e-09 | 3 |
natural killer cell | 3.82e-09 | 3 |
pro-NK cell | 3.82e-09 | 3 |
hematopoietic stem cell | 4.14e-08 | 168 |
regulatory T cell | 9.58e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.58e-08 | 2 |
naive regulatory T cell | 9.58e-08 | 2 |
hematopoietic cell | 2.27e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-22 | 15 |
haemolymphatic fluid | 3.35e-22 | 15 |
organism substance | 3.35e-22 | 15 |
thymus | 4.02e-08 | 4 |
hemolymphoid system gland | 4.02e-08 | 4 |
thymic region | 4.02e-08 | 4 |
pharyngeal gland | 4.02e-08 | 4 |
thymus primordium | 4.02e-08 | 4 |
hemopoietic organ | 1.66e-07 | 7 |
immune organ | 1.66e-07 | 7 |