FFCP PHASE1:Hg19::chr3:127317243..127317288,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4171 | |EntrezGene=4171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6944 | |HGNC=6944 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDM3,F5H3V0,F5H1E9,P49736 | |UniProt=F8WDM3,F5H3V0,F5H1E9,P49736 | ||
|association_with_transcript=0bp_to_ENST00000474964,ENST00000539922,ENST00000543142,NM_004526,uc003ejp.2,uc011bkm.1_5end | |association_with_transcript=0bp_to_ENST00000474964,ENST00000539922,ENST00000543142,NM_004526,uc003ejp.2,uc011bkm.1_5end | ||
|cluster_id=chr3:127317243..127317288,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_MCM2_5end | |description=CAGE_peak_1_at_MCM2_5end | ||
|id=chr3:127317243..127317288,+ | |id=chr3:127317243..127317288,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.08e-19!254;CL:0000012!1.93e-19!682;CL:0000548!6.94e-19!679;CL:0000004!6.94e-19!679;CL:0000255!6.94e-19!679;CL:0000003!1.24e-11!722;CL:0000063!2.36e-09!578;CL:0000333!3.16e-08!41;CL:0002319!8.30e-08!25;CL:0002321!8.56e-08!248;CL:0000220!2.02e-07!246 | |ontology_enrichment_celltype=CL:0000066!1.08e-19!254;CL:0000012!1.93e-19!682;CL:0000548!6.94e-19!679;CL:0000004!6.94e-19!679;CL:0000255!6.94e-19!679;CL:0000003!1.24e-11!722;CL:0000063!2.36e-09!578;CL:0000333!3.16e-08!41;CL:0002319!8.30e-08!25;CL:0002321!8.56e-08!248;CL:0000220!2.02e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.15e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.17e-20,253;CL:0000333,3.16e-08,41;CL:0002319,8.29e-08,25;CL:0002321,8.70e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.33e-52!235;DOID:14566!1.23e-50!239;DOID:0050687!6.04e-26!143;DOID:0050686!2.75e-25!137;DOID:305!7.93e-23!106;DOID:2531!1.70e-22!51;DOID:0060083!1.70e-22!51;DOID:1240!3.84e-19!39;DOID:8692!2.40e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.62e-15;39!DOID:8692;7.52e-15;31!DOID:2531;4.75e-14;51!DOID:0060083;4.75e-14;51!DOID:305;6.38e-08;106!DOID:14566;7.79e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.30e-52,235;DOID:14566,1.23e-50,239;DOID:0050687,6.03e-26,143;DOID:0050686,2.74e-25,137;DOID:305,7.92e-23,106;DOID:2531,1.70e-22,51;DOID:0060083,1.70e-22,51;DOID:1240,3.84e-19,39;DOID:8692,2.40e-15,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.57e-07!9;UBERON:0000072!3.63e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!3.57e-07!9;UBERON:0000072!3.63e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.53e-07;9!UBERON:0001557;3.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.57e-07,9;UBERON:0000072,7.01e-07,47 | |||
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| ||
|short_description=p1@MCM2 | |short_description=p1@MCM2 | ||
}} | }} |
Latest revision as of 05:18, 20 September 2015
Short description: | p1@MCM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCM2_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000474964, ENST00000539922, ENST00000543142, NM_004526, uc003ejp.2, uc011bkm.1_5end |
EntrezGene: | MCM2 |
HGNC: | 6944 |
UniProt: | F8WDM3F5H3V0F5H1E9P49736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.17e-20 | 253 |
migratory neural crest cell | 3.16e-08 | 41 |
neural cell | 8.29e-08 | 25 |
embryonic cell | 8.70e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.57e-07 | 9 |
segment of respiratory tract | 7.01e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.30e-52 | 235 |
disease of cellular proliferation | 1.23e-50 | 239 |
cell type cancer | 6.03e-26 | 143 |
organ system cancer | 2.74e-25 | 137 |
carcinoma | 7.92e-23 | 106 |
hematologic cancer | 1.70e-22 | 51 |
immune system cancer | 1.70e-22 | 51 |
leukemia | 3.84e-19 | 39 |
myeloid leukemia | 2.40e-15 | 31 |