FFCP PHASE1:Hg19::chr12:6960113..6960124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83461 | |EntrezGene=83461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14624 | |HGNC=14624 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=297bp_to_ENST00000535406_5end | |association_with_transcript=297bp_to_ENST00000535406_5end | ||
|cluster_id=chr12:6960113..6960124,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_8_at_CDCA3_5end | |description=CAGE_peak_8_at_CDCA3_5end | ||
|id=chr12:6960113..6960124,- | |id=chr12:6960113..6960124,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.57e-09;4!CL:1000306;1.57e-09;4!CL:0002547;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-09,4;CL:1000306,1.57e-09,4;CL:0002547,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.16e-07!35 | |ontology_enrichment_uberon=UBERON:0005409!3.16e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.34e-30;17!UBERON:0002108;1.70e-27;4!UBERON:0005409;1.55e-23;22!UBERON:0004921;2.01e-15;33!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0004797;1.57e-09;4!UBERON:0000415;1.57e-09;4!UBERON:0007240;1.57e-09;4!UBERON:0005742;1.57e-09;4!UBERON:0005734;1.57e-09;4!UBERON:0004664;1.57e-09;4!UBERON:0004663;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.82e-30,17;UBERON:0002108,1.82e-27,4;UBERON:0005409,6.29e-21,25;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0000415,1.57e-09,4;UBERON:0007240,1.57e-09,4;UBERON:0005742,1.57e-09,4;UBERON:0005734,1.57e-09,4;UBERON:0004664,1.57e-09,4;UBERON:0004663,1.57e-09,4 | |||
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| ||
|short_description=p8@CDCA3 | |short_description=p8@CDCA3 | ||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p8@CDCA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDCA3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 297bp_to_ENST00000535406_5end |
EntrezGene: | CDCA3 |
HGNC: | 14624 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-09 | 4 |
fibroblast of tunica adventitia of artery | 1.57e-09 | 4 |
fibroblast of the aortic adventitia | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.82e-30 | 17 |
small intestine | 1.82e-27 | 4 |
gastrointestinal system | 6.29e-21 | 25 |
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
artery wall | 1.57e-09 | 4 |
tunica adventitia of artery | 1.57e-09 | 4 |
adventitia | 1.57e-09 | 4 |
tunica adventitia of blood vessel | 1.57e-09 | 4 |
aorta tunica adventitia | 1.57e-09 | 4 |
aorta wall | 1.57e-09 | 4 |