FFCP PHASE1:Hg19::chr1:206680853..206680871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83593 | |EntrezGene=83593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17609 | |HGNC=17609 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWW0,E9PDX5,Q59GG4 | |UniProt=Q8WWW0,E9PDX5,Q59GG4 | ||
|association_with_transcript=-7bp_to_ENST00000338603,ENST00000355294,ENST00000367117,ENST00000367118,NM_182663,NM_182664,uc001hec.1,uc001hed.2,uc001hee.2_5end | |association_with_transcript=-7bp_to_ENST00000338603,ENST00000355294,ENST00000367117,ENST00000367118,NM_182663,NM_182664,uc001hec.1,uc001hed.2,uc001hee.2_5end | ||
|cluster_id=chr1:206680853..206680871,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_1_at_RASSF5_5end | |description=CAGE_peak_1_at_RASSF5_5end | ||
|id=chr1:206680853..206680871,+ | |id=chr1:206680853..206680871,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.58e-17!45;CL:0002057!2.56e-16!42;CL:0000766!1.59e-13!76;CL:0000557!1.60e-11!71;CL:0002009!1.22e-10!65;CL:0000839!5.43e-10!70;CL:0002194!1.03e-09!63;CL:0000576!1.03e-09!63;CL:0000040!1.03e-09!63;CL:0000559!1.03e-09!63;CL:0000763!9.32e-07!112;CL:0000049!9.32e-07!112 | |ontology_enrichment_celltype=CL:0000860!1.58e-17!45;CL:0002057!2.56e-16!42;CL:0000766!1.59e-13!76;CL:0000557!1.60e-11!71;CL:0002009!1.22e-10!65;CL:0000839!5.43e-10!70;CL:0002194!1.03e-09!63;CL:0000576!1.03e-09!63;CL:0000040!1.03e-09!63;CL:0000559!1.03e-09!63;CL:0000763!9.32e-07!112;CL:0000049!9.32e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-18;33!CL:0002057;1.13e-18;33!CL:0000473;5.35e-13;39!CL:0000234;5.35e-13;39!CL:0000576;1.64e-08;48!CL:0000766;4.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-17,42;CL:0002057,1.12e-17,42;CL:0000473,6.91e-15,48;CL:0000234,6.91e-15,48;CL:0000766,1.13e-12,72;CL:0000557,9.35e-11,67;CL:0002009,1.08e-09,61;CL:0000839,2.49e-09,66;CL:0002194,9.38e-09,59;CL:0000576,9.38e-09,59;CL:0000040,9.38e-09,59;CL:0000559,9.38e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.97e-19!511;UBERON:0007023!2.20e-11!115;UBERON:0002405!2.47e-09!115;UBERON:0000480!6.97e-09!626;UBERON:0000467!1.15e-08!625;UBERON:0002371!1.76e-08!80;UBERON:0001557!1.10e-07!19;UBERON:0000077!1.14e-07!130;UBERON:0004119!1.19e-07!169;UBERON:0000925!1.19e-07!169;UBERON:0006595!1.19e-07!169;UBERON:0004921!1.34e-07!129;UBERON:0004185!1.34e-07!129;UBERON:0001007!2.16e-07!155;UBERON:0001555!2.16e-07!155;UBERON:0007026!2.16e-07!155;UBERON:0002390!2.40e-07!102;UBERON:0003061!2.40e-07!102;UBERON:0001474!3.15e-07!86;UBERON:0001041!4.22e-07!98;UBERON:0002193!6.84e-07!112 | |ontology_enrichment_uberon=UBERON:0000062!6.97e-19!511;UBERON:0007023!2.20e-11!115;UBERON:0002405!2.47e-09!115;UBERON:0000480!6.97e-09!626;UBERON:0000467!1.15e-08!625;UBERON:0002371!1.76e-08!80;UBERON:0001557!1.10e-07!19;UBERON:0000077!1.14e-07!130;UBERON:0004119!1.19e-07!169;UBERON:0000925!1.19e-07!169;UBERON:0006595!1.19e-07!169;UBERON:0004921!1.34e-07!129;UBERON:0004185!1.34e-07!129;UBERON:0001007!2.16e-07!155;UBERON:0001555!2.16e-07!155;UBERON:0007026!2.16e-07!155;UBERON:0002390!2.40e-07!102;UBERON:0003061!2.40e-07!102;UBERON:0001474!3.15e-07!86;UBERON:0001041!4.22e-07!98;UBERON:0002193!6.84e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.66e-12,114;UBERON:0001041,5.23e-09,87;UBERON:0004921,1.32e-08,118;UBERON:0002405,1.44e-08,93;UBERON:0004119,2.52e-08,160;UBERON:0000925,2.52e-08,160;UBERON:0006595,2.52e-08,160;UBERON:0001007,4.45e-08,145;UBERON:0001555,4.45e-08,145;UBERON:0007026,4.45e-08,145;UBERON:0002371,7.37e-08,76;UBERON:0001557,1.14e-07,19;UBERON:0002390,3.63e-07,98;UBERON:0003061,3.63e-07,98;UBERON:0011216,3.82e-07,223;UBERON:0002193,5.72e-07,108 | |||
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| ||
|short_description=p1@RASSF5 | |short_description=p1@RASSF5 | ||
}} | }} |
Latest revision as of 04:49, 20 September 2015
Short description: | p1@RASSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -7bp_to_ENST00000338603, ENST00000355294, ENST00000367117, ENST00000367118, NM_182663, NM_182664, uc001hec.1, uc001hed.2, uc001hee.2_5end |
EntrezGene: | RASSF5 |
HGNC: | 17609 |
UniProt: | Q8WWW0E9PDX5Q59GG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-17 | 42 |
defensive cell | 6.91e-15 | 48 |
phagocyte | 6.91e-15 | 48 |
myeloid leukocyte | 1.13e-12 | 72 |
granulocyte monocyte progenitor cell | 9.35e-11 | 67 |
macrophage dendritic cell progenitor | 1.08e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-09 | 66 |
monopoietic cell | 9.38e-09 | 59 |
monocyte | 9.38e-09 | 59 |
monoblast | 9.38e-09 | 59 |
promonocyte | 9.38e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.66e-12 | 114 |
foregut | 5.23e-09 | 87 |
subdivision of digestive tract | 1.32e-08 | 118 |
immune system | 1.44e-08 | 93 |
endoderm-derived structure | 2.52e-08 | 160 |
endoderm | 2.52e-08 | 160 |
presumptive endoderm | 2.52e-08 | 160 |
digestive system | 4.45e-08 | 145 |
digestive tract | 4.45e-08 | 145 |
primitive gut | 4.45e-08 | 145 |
bone marrow | 7.37e-08 | 76 |
upper respiratory tract | 1.14e-07 | 19 |
hematopoietic system | 3.63e-07 | 98 |
blood island | 3.63e-07 | 98 |
organ system subdivision | 3.82e-07 | 223 |
hemolymphoid system | 5.72e-07 | 108 |