FFCP PHASE1:Hg19::chr19:571515..571536,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:571515..571536,+ to FFCP PHASE1:Hg19::chr19:571515..571536,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=682 | |EntrezGene=682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1116 | |HGNC=1116 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJW1,P35613,Q54A51 | |UniProt=A6NJW1,P35613,Q54A51 | ||
|association_with_transcript=190bp_to_NM_198591,uc002loy.2_5end | |||
|cluster_id=chr19:571515..571536,+ | |||
|description=CAGE_peak_5_at_BSG_5end | |||
|id=chr19:571515..571536,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.35e-13!52;CL:0000542!3.01e-13!53;CL:0000051!3.01e-13!53;CL:0000037!2.65e-12!172;CL:0000566!2.65e-12!172;CL:0000988!4.73e-11!182;CL:0002032!7.59e-11!165;CL:0000837!7.59e-11!165;CL:0002087!7.17e-09!119;CL:0002031!4.63e-08!124;CL:0000738!1.11e-07!140;CL:0000084!7.91e-07!25;CL:0000827!7.91e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.39e-08;24!CL:0000542;1.79e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.28e-14,52;CL:0000542,1.27e-13,53;CL:0000051,1.27e-13,53;CL:0000037,2.66e-11,168;CL:0000988,3.49e-10,177;CL:0002032,6.61e-10,161;CL:0000837,6.61e-10,161;CL:0000945,1.56e-08,24;CL:0000826,1.56e-08,24;CL:0002031,4.90e-07,120;CL:0002087,9.13e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.79e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!6.74e-10!51;DOID:0060083!6.74e-10!51;DOID:162!1.59e-08!235;DOID:14566!2.81e-08!239;DOID:1240!9.58e-08!39;DOID:8692!5.97e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.69e-09;51!DOID:0060083;9.69e-09;51!DOID:8692;3.85e-08;31!DOID:0060058;1.05e-07;10!DOID:1240;2.63e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.13e-14,51;DOID:0060083,1.13e-14,51;DOID:162,2.63e-10,235;DOID:1240,6.29e-10,39;DOID:14566,7.91e-10,239;DOID:0050686,2.54e-09,137;DOID:8692,1.74e-08,31;DOID:0060058,6.96e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,4.88460817580699,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,1.43117993565528,0.821246550437305,0.502170558379211,0.687720651731561,0.656804715599566,1.18066171970519,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,5.34523684004081,1.9903692548239,0.587200878669695,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0.633765858935825,0,0.628975936525128,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0,0,3.27683166757279,2.66852776159066,0,0,0.574752439954483,1.32208974556972,2.86216126360609,1.1384259382189,1.17447437874188,0.764546456250458,1.32171328579026,2.24203425192614,1.05353633910031,0.590129310341499,0.393010762749165,0,0,0.977766799900771,0.946895611469467,0,0.111410456885174,0.294605907474837,0.886135578334485,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.579606171470105,0.444859689486181,0.267540828089713,1.04535523804977,0,0.766440987203842,0.34362744548263,0.506039384039006,0.95569624297229,1.95325036156926,0,1.50575119077773,0.383959833463255,1.24930726552346,0.710331756132051,1.64225599384209,2.21767417547206,0.534880391567015,1.44824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.886917589850256,0.43917392846563,0.327447688744282,0.364295288292542,0.370784442784429,0,0.174129737299267,0,1.19245312152671,0,1.48583000531826,0,0,0,1.13061588384802,0,0.825354125820202,0,0,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,0.488124115096339,0.367663080345869,0,1.07159673940896,0.673588117878509,0.675668882899933,0,0.949265659568129,0.549605231791222,1.31780417436063,0,0.436094052142534,0,0.379891534993739,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.609868530647977,0.397589304964456,0.232387885739037,0.725627385107593,0.252320850875628,0,0,0,0,0,0,1.18306800039844,0.842923450390509,0.482022059766964,0.772057809126758,0.653638332277218,0.474541238222193,0.943819157121151,0.588664395376038,1.53898862778556,0.738155454624648,0,0,0,0,0,0,4.41463099414651,0.983907508344908,0,0,0,0.201057944823262,0,0.651616610620649,0,1.44331342025273,0.463721619900307,0.234817388471643,0,0.925971025153221,0.761016608938393,3.1608175918371,0,0.492434012174795,0,0.891786973732369,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,3.4214489204541,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,1.12085143993527,1.57624608161542,0.646882724578552,0.898401253958239,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,0.195801157462741,0.343143423810856,0.620304078368662,1.07857100409308,0.640365346820666,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,2.1754700926492,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.524497659837696,0,0.462092022626489,5.49044838423799,1.46139224653261,0.949964660035881,0,0.680374821106063,0.863663664408557,1.54227252690289,0,0,1.01950509218015,0.831076008928724,0.895499018888713,2.41185864310528,2.87578996127391,1.53870075069834,0.656029291399411,0.325378394664303,0.103041011647722,0.732555718546747,0.990113999047056,0,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0.37064843820784,0,0,0.632758849437452,0,0.767693373934002,0,0,0,0,0.54907405947211,0.589062011728432,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.565621727814851,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0.655894752046633,0.608731130888112,0.6196469961995,0.563391205064483,0,0.0982490410131212,1.07001315444375,0,0,0,0.379473173765715,0.699869440489966,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086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| ||
|short_description=p5@BSG | |||
}} | }} |
Latest revision as of 04:37, 20 September 2015
Short description: | p5@BSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BSG_5end |
Coexpression cluster: | NA |
Association with transcript: | 190bp_to_NM_198591, uc002loy.2_5end |
EntrezGene: | BSG |
HGNC: | 1116 |
UniProt: | A6NJW1P35613Q54A51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.28e-14 | 52 |
lymphocyte | 1.27e-13 | 53 |
common lymphoid progenitor | 1.27e-13 | 53 |
hematopoietic stem cell | 2.66e-11 | 168 |
hematopoietic cell | 3.49e-10 | 177 |
hematopoietic oligopotent progenitor cell | 6.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-10 | 161 |
lymphocyte of B lineage | 1.56e-08 | 24 |
pro-B cell | 1.56e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 4.90e-07 | 120 |
nongranular leukocyte | 9.13e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.13e-14 | 51 |
immune system cancer | 1.13e-14 | 51 |
cancer | 2.63e-10 | 235 |
leukemia | 6.29e-10 | 39 |
disease of cellular proliferation | 7.91e-10 | 239 |
organ system cancer | 2.54e-09 | 137 |
myeloid leukemia | 1.74e-08 | 31 |
lymphoma | 6.96e-08 | 10 |