FFCP PHASE1:Hg19::chr20:12989895..12989914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55304 | |EntrezGene=55304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16253 | |HGNC=16253 | ||
|TSSclassifier=strong | |||
|UniProt=C9JC36 | |UniProt=C9JC36 | ||
|association_with_transcript=73bp_to_ENST00000378194_5end | |association_with_transcript=73bp_to_ENST00000378194_5end | ||
|cluster_id=chr20:12989895..12989914,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_5_at_SPTLC3_5end | |description=CAGE_peak_5_at_SPTLC3_5end | ||
|id=chr20:12989895..12989914,+ | |id=chr20:12989895..12989914,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.27e-11;3!CL:0000135;1.18e-10;3!CL:0000388;1.18e-10;3!CL:0002602;6.95e-08;2!CL:0002537;5.71e-07;5!CL:0000622;9.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.69e-11,3;CL:0000135,7.46e-11,3;CL:0000388,7.46e-11,3;CL:0002602,3.44e-08,2;CL:0002537,4.60e-07,5;CL:0000622,9.84e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-13!115;UBERON:0000062!2.60e-11!511;UBERON:0000481!5.73e-08!347;UBERON:0000064!1.01e-07!219;UBERON:0000077!2.93e-07!130;UBERON:0001007!3.79e-07!155;UBERON:0001555!3.79e-07!155;UBERON:0007026!3.79e-07!155;UBERON:0000468!4.28e-07!659;UBERON:0004119!4.88e-07!169;UBERON:0000925!4.88e-07!169;UBERON:0006595!4.88e-07!169;UBERON:0000467!7.04e-07!625;UBERON:0001049!8.49e-07!57;UBERON:0005068!8.49e-07!57;UBERON:0006241!8.49e-07!57;UBERON:0007135!8.49e-07!57;UBERON:0000477!8.77e-07!286;UBERON:0000480!8.87e-07!626;UBERON:0001044!9.24e-07!6;UBERON:0003293!9.24e-07!6;UBERON:0003294!9.24e-07!6;UBERON:0010047!9.24e-07!6;UBERON:0000167!9.24e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.80e-20;6!UBERON:0003293;2.80e-20;6!UBERON:0003294;2.80e-20;6!UBERON:0010047;2.80e-20;6!UBERON:0003408;2.80e-20;6!UBERON:0000167;2.80e-20;6!UBERON:0007846;1.18e-10;3!UBERON:0000043;1.18e-10;3!UBERON:0007845;1.18e-10;3!UBERON:0005631;8.46e-09;10!UBERON:0000158;8.46e-09;10!UBERON:0001041;2.75e-08;14!UBERON:0001829;3.93e-08;2!UBERON:0006444;6.95e-08;2!UBERON:0001995;6.95e-08;2!UBERON:0004715;6.95e-08;2!UBERON:0000161;7.30e-08;19!UBERON:0000166;7.30e-08;19!UBERON:0001905;2.01e-07;2!UBERON:0002757;2.01e-07;2!UBERON:0010134;2.01e-07;2!UBERON:0005408;2.01e-07;2!UBERON:0001899;2.01e-07;2!UBERON:0002365;2.57e-07;31!UBERON:0002330;2.57e-07;31!UBERON:0004905;4.77e-07;8!UBERON:0000982;4.77e-07;8!UBERON:0004770;4.77e-07;8!UBERON:0011135;6.98e-07;5!UBERON:0002216;6.98e-07;5!UBERON:0011134;6.98e-07;5!UBERON:0002209;6.98e-07;5!UBERON:0002213;6.98e-07;5!UBERON:0007844;6.98e-07;5!UBERON:0011138;6.98e-07;5!UBERON:0001130;6.98e-07;5!UBERON:0001066;6.98e-07;5!UBERON:0001468;6.98e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.90e-20,6;UBERON:0003293,1.90e-20,6;UBERON:0003294,1.90e-20,6;UBERON:0010047,1.90e-20,6;UBERON:0000167,1.90e-20,6;UBERON:0003408,5.50e-12,10;UBERON:0007846,7.46e-11,3;UBERON:0000043,7.46e-11,3;UBERON:0007845,7.46e-11,3;UBERON:0005631,7.65e-09,14;UBERON:0000158,7.65e-09,14;UBERON:0000166,1.01e-08,22;UBERON:0006444,3.44e-08,2;UBERON:0001995,3.44e-08,2;UBERON:0004715,3.44e-08,2;UBERON:0001829,4.24e-08,2;UBERON:0004905,3.53e-07,8;UBERON:0000982,3.53e-07,8;UBERON:0004770,3.53e-07,8;UBERON:0002365,3.91e-07,31;UBERON:0002330,3.91e-07,31;UBERON:0011135,4.69e-07,5;UBERON:0002216,4.69e-07,5;UBERON:0011134,4.69e-07,5;UBERON:0002209,4.69e-07,5;UBERON:0002213,4.69e-07,5;UBERON:0005856,4.69e-07,5;UBERON:0005866,4.69e-07,5;UBERON:0005863,4.69e-07,5;UBERON:0007844,4.69e-07,5;UBERON:0011138,4.69e-07,5;UBERON:0001130,4.69e-07,5;UBERON:0001066,4.69e-07,5;UBERON:0001468,4.69e-07,5;UBERON:0001905,6.46e-07,2;UBERON:0002757,6.46e-07,2;UBERON:0010134,6.46e-07,2;UBERON:0005408,6.46e-07,2;UBERON:0001899,6.46e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0.263766978228454,3.58922423584135,1.98838425436749,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852449501065388,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0.869079113764942,0.795285947051099,0.486634870302636,0.378139268656271,0.221729397462564,0.43917392846563,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,1.43418310374407,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.516628905878827,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0,0,3.55621325001386,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.505754070234305,0,0.55146986366197,0.871517776369625,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0.737930631258681,0.514703430895577,0.548751427043128,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0.904318131178758,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,4.27910715122155,0,0.61642896765115,1.07436577943937,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,3.43536176813592,0,0.271265023699736,0,0.535286966391485,0,0.585707074963566,0.601892199455438,0,3.10419213877515,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0.909382714338778,0,0.907170879989041,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,8.86152700170411,0,0.082509499920588,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0.429680979473094,0,0.170453254832202,0.267096106940212,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,8.00222306602623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,1.13654458722565,4.29740072527842,1.48482340416319,4.91457123358771,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.988551862620595,0,0,0.394573622547734,0,0,0,0,0,0,0.61221999997337,1.44999915086959,0,0.508507300585533,0.472775363535873,0,0,0,0,0.241192877250816,3.05163472634166,0.331737779793674,0.591095237907095,0.658156191461918,0.435753854075961,0.975966209950223,0.230850775511391,0,1.84451123510448,3.68006342080066,2.49888955420619,2.87101043758728,0.549585560411174,4.79731298416771,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0.706765357169704,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0,0,0.471807930864739,0.802577647298789,0,0,1.17398771359254,0,0.394584402849391,0,0,2.78020950365347,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0.979923974143776,0.261177619741208,0.698906672968121,0,0,0,0,0.387956065953678,0,1.12990370390266,0.137041924646751,0.397429223405979,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0,0.432164393964449,0.124252535565433,0.235694034616795,0,0,0.407992870545287,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0,1.11712960508902,0.916641696046735,0,0.199679000498991,0.858452096273142,0.446342914883745,0.201550417460179,0,0,1.10296455230113,0.659326867049332,1.21326378937533,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0.35857467866569,0.191915197319445,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,0.113312091520126,0.439656701034247,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.427149650270779,1.41483874589699,0.414239055347196,0,0,0,1.27668251554036,0.544017803369474,0,0.919036730290385,0,0,0,0.488105059607853,0.1251909307065,0,1.66393577305278,0.807253238237985,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0,0,0.568209015825267,1.25783950876288,0.889811221596536,0,0.453692771289717,0.310874401165561,0.147855149989634,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0,0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| ||
|short_description=p5@SPTLC3 | |short_description=p5@SPTLC3 | ||
}} | }} |
Latest revision as of 04:27, 20 September 2015
Short description: | p5@SPTLC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPTLC3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 73bp_to_ENST00000378194_5end |
EntrezGene: | SPTLC3 |
HGNC: | 16253 |
UniProt: | C9JC36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.69e-11 | 3 |
fibrocyte | 7.46e-11 | 3 |
tendon cell | 7.46e-11 | 3 |
annulus pulposus cell | 3.44e-08 | 2 |
amnion mesenchymal stem cell | 4.60e-07 | 5 |
acinar cell | 9.84e-07 | 5 |