FFCP PHASE1:Hg19::chr6:121756901..121756912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2697 | |EntrezGene=2697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4274 | |HGNC=4274 | ||
|TSSclassifier=strong | |||
|UniProt=P17302 | |UniProt=P17302 | ||
|association_with_transcript=63bp_to_ENST00000282561_5end | |association_with_transcript=63bp_to_ENST00000282561_5end | ||
|cluster_id=chr6:121756901..121756912,+ | |||
|coexpression_cluster_id=C256 | |coexpression_cluster_id=C256 | ||
|description=CAGE_peak_4_at_GJA1_5end | |description=CAGE_peak_4_at_GJA1_5end | ||
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|ontology_enrichment_celltype=CL:0000197!2.27e-08!6;CL:0000098!2.27e-08!6;CL:0002167!2.27e-08!6;CL:0000453!6.96e-07!5 | |ontology_enrichment_celltype=CL:0000197!2.27e-08!6;CL:0000098!2.27e-08!6;CL:0002167!2.27e-08!6;CL:0000453!6.96e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.34e-11;6!CL:0000404;6.34e-11;6 | |ontology_enrichment_celltype_v019=CL:0000540;6.34e-11;6!CL:0000404;6.34e-11;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.52e-11,6;CL:0000031,6.52e-11,6;CL:0000404,6.52e-11,6;CL:0000047,3.35e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000031;6.34e-11;6 | |ontology_enrichment_development_v019=CL:0000031;6.34e-11;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.28e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;5.28e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.43e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000349;1.76e-13;5!UBERON:0003528;5.14e-12;34!UBERON:0002020;5.14e-12;34!UBERON:0001869;3.51e-11;32!UBERON:0002791;1.06e-10;32!UBERON:0002619;1.52e-10;22!UBERON:0001893;1.45e-09;34!UBERON:0001876;2.69e-09;2!UBERON:0001954;3.05e-09;2!UBERON:0003022;3.05e-09;2!UBERON:0002421;3.05e-09;2!UBERON:0002600;3.05e-09;2!UBERON:0000956;3.59e-09;25!UBERON:0000203;3.59e-09;25!UBERON:0002780;3.97e-09;41!UBERON:0001890;3.97e-09;41!UBERON:0002420;7.81e-08;9!UBERON:0007245;7.81e-08;9!UBERON:0010009;7.81e-08;9!UBERON:0010011;7.81e-08;9!UBERON:0000454;7.81e-08;9!UBERON:0000073;2.03e-07;53!UBERON:0002616;2.03e-07;53!UBERON:0001950;9.35e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0000349;1.76e-13;5!UBERON:0003528;5.14e-12;34!UBERON:0002020;5.14e-12;34!UBERON:0001869;3.51e-11;32!UBERON:0002791;1.06e-10;32!UBERON:0002619;1.52e-10;22!UBERON:0001893;1.45e-09;34!UBERON:0001876;2.69e-09;2!UBERON:0001954;3.05e-09;2!UBERON:0003022;3.05e-09;2!UBERON:0002421;3.05e-09;2!UBERON:0002600;3.05e-09;2!UBERON:0000956;3.59e-09;25!UBERON:0000203;3.59e-09;25!UBERON:0002780;3.97e-09;41!UBERON:0001890;3.97e-09;41!UBERON:0002420;7.81e-08;9!UBERON:0007245;7.81e-08;9!UBERON:0010009;7.81e-08;9!UBERON:0010011;7.81e-08;9!UBERON:0000454;7.81e-08;9!UBERON:0000073;2.03e-07;53!UBERON:0002616;2.03e-07;53!UBERON:0001950;9.35e-07;20 | ||
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|short_description=p4@GJA1 | |short_description=p4@GJA1 | ||
}} | }} |
Latest revision as of 04:03, 20 September 2015
Short description: | p4@GJA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GJA1_5end |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | 63bp_to_ENST00000282561_5end |
EntrezGene: | GJA1 |
HGNC: | 4274 |
UniProt: | P17302 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.52e-11 | 6 |
neuroblast | 6.52e-11 | 6 |
electrically signaling cell | 6.52e-11 | 6 |
neuronal stem cell | 3.35e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.43e-07 | 14 |