FFCP PHASE1:Hg19::chr9:113342305..113342325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79987 | |EntrezGene=79987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |HGNC=15985 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQM1,Q4LDE5 | |UniProt=B3KQM1,Q4LDE5 | ||
|association_with_transcript=-145bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | |association_with_transcript=-145bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | ||
|cluster_id=chr9:113342305..113342325,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_9_at_SVEP1_5end | |description=CAGE_peak_9_at_SVEP1_5end | ||
|id=chr9:113342305..113342325,- | |id=chr9:113342305..113342325,- | ||
|ontology_enrichment_celltype=CL:0000057!1.78e-16!75;CL:0000055!9.60e-11!180;CL:0000136!3.40e-08!15 | |ontology_enrichment_celltype=CL:0000057!1.78e-16!75;CL:0000055!9.60e-11!180;CL:0000136!3.40e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002559;1.05e-09;5!CL:0000136;1.50e-09;13!CL:0002552;3.96e-09;5!CL:0002615;5.60e-09;3!CL:0002561;3.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.44e-09,5;CL:0002552,3.37e-09,5;CL:0002615,6.75e-09,3;CL:0000136,3.34e-08,15;CL:0000057,4.65e-08,76;CL:0002561,4.42e-07,2;CL:0002602,7.23e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.08e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.67e-09!83;UBERON:0002329!3.67e-09!83;UBERON:0003077!3.67e-09!83;UBERON:0003059!3.67e-09!83;UBERON:0007282!3.67e-09!83;UBERON:0009618!3.67e-09!83;UBERON:0007285!3.67e-09!83;UBERON:0002100!9.07e-09!216;UBERON:0004457!9.38e-09!12;UBERON:0000042!9.38e-09!12;UBERON:0005256!1.24e-07!143;UBERON:0000475!2.13e-07!365;UBERON:0003102!4.49e-07!95;UBERON:0000481!5.03e-07!347;UBERON:0003688!7.22e-07!6;UBERON:0002358!7.22e-07!6;UBERON:0003684!7.22e-07!6;UBERON:0001178!7.22e-07!6 | |ontology_enrichment_uberon=UBERON:0000914!3.67e-09!83;UBERON:0002329!3.67e-09!83;UBERON:0003077!3.67e-09!83;UBERON:0003059!3.67e-09!83;UBERON:0007282!3.67e-09!83;UBERON:0009618!3.67e-09!83;UBERON:0007285!3.67e-09!83;UBERON:0002100!9.07e-09!216;UBERON:0004457!9.38e-09!12;UBERON:0000042!9.38e-09!12;UBERON:0005256!1.24e-07!143;UBERON:0000475!2.13e-07!365;UBERON:0003102!4.49e-07!95;UBERON:0000481!5.03e-07!347;UBERON:0003688!7.22e-07!6;UBERON:0002358!7.22e-07!6;UBERON:0003684!7.22e-07!6;UBERON:0001178!7.22e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.00e-14;9!UBERON:0000042;2.00e-14;9!UBERON:0003688;3.59e-11;6!UBERON:0002358;3.59e-11;6!UBERON:0003684;3.59e-11;6!UBERON:0001178;3.59e-11;6!UBERON:0002073;1.05e-09;5!UBERON:0004905;4.01e-09;8!UBERON:0000982;4.01e-09;8!UBERON:0004770;4.01e-09;8!UBERON:0000075;1.36e-07;16!UBERON:0005933;3.90e-07;2!UBERON:0005942;3.90e-07;2!UBERON:0005932;3.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.58e-11,6;UBERON:0002358,5.58e-11,6;UBERON:0003684,5.58e-11,6;UBERON:0001178,5.58e-11,6;UBERON:0004457,1.86e-10,12;UBERON:0000042,1.86e-10,12;UBERON:0002073,1.44e-09,5;UBERON:0005086,1.44e-09,5;UBERON:0004905,2.81e-09,8;UBERON:0000982,2.81e-09,8;UBERON:0004770,2.81e-09,8;UBERON:0004923,4.21e-09,66;UBERON:0000075,1.34e-07,16;UBERON:0005933,4.42e-07,2;UBERON:0005942,4.42e-07,2;UBERON:0005932,4.42e-07,2;UBERON:0006444,7.23e-07,2;UBERON:0001995,7.23e-07,2;UBERON:0004715,7.23e-07,2;UBERON:0005406,9.34e-07,2 | |||
|phase1_expression=1.63510541343501,2.5692062866918,1.55049844505568,4.00293193412522,1.34088328328186,1.74467704820074,0,0,0.522371256399677,0,0,0,0,1.8564952944007,3.64537113300707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0.722878304769133,1.50401373190767,1.15877215168659,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.58891016975863,5.16305917347865,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0.756787138224657,1.72852777344,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,1.42907919878425,0.368502951935304,1.65321249881225,2.37600571456411,2.47266929278557,0,0,0.168336113954066,0.375355559615893,1.10825646193673,1.75591048352335,0.612975591598039,1.50238058906597,0.113432183160021,0.538168907066586,0.427114777637135,0.847727604638247,0,0.721367704669072,0,0.18611685633159,0.337552664482532,0.194874010322397,0.504867548488229,1.93304787148829,3.87950536365149,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,1.38134921352481,6.03678306441573,2.16563844500876,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.857867961948885,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0672872929785,0.500170521059677,0.813795071099207,0.207970861530807,1.24900292158013,1.41932173530541,2.22568688486155,1.80567659836631,0,1.03473071292505,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,1.99500565274481,0.561320188866147,1.66580894032411,1.02341449813341,0.64341568457443,2.96836132889982,0.154209693802656,0,0,0,0,0,0,0,0.459257792658427,1.0925470080403,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0439877005675,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.751941714077915,1.30515024522806,0,0.178064071293475,0,0,0,0,0,1.88887408098384,0.6970372701606,0,0,0,0,0,0.372158369359667,0,1.14378116354295,0.255897791311334,0.855877976067841,0.95460974377781,0,3.23770423649967,1.92175920815238,0.824686816419805,0.202182481573316,0,0,1.46290121726877,0,0,1.22849920267187,0.565621727814851,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0,0.491245205065606,0.35667105148125,0,2.74439925886963,4.61012850143863,0,0.699869440489966,0,0,0,17.1341717413738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.796991953004279,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.690503839458535,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.442317039724898,0,0,0,0,0.769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0.789168805698781,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,2.03382666702479,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,1.43574604915363,0,0.429226048136571,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0.383830394638891,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.427149650270779,1.57204305099666,0.414239055347196,1.48849806543585,0,0,0,2.1760712134779,0.7520696820681,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.754703705257725,0.889811221596536,0.228840068396924,0.756154618816195,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0.643324774124777,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,0,2.1160556621441,1.531227386766,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0.655087670040387,0,0.135075169236789,0,0,0.126831620387814,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,43.9076732305062,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.428859265059938,0,0,0,2.40513409419076,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.23195368227496,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0,0.169927114687817,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,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| ||
|short_description=p9@SVEP1 | |short_description=p9@SVEP1 | ||
}} | }} |
Latest revision as of 03:36, 20 September 2015
Short description: | p9@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SVEP1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -145bp_to_ENST00000374461, ENST00000401783, NM_153366, uc004beu.2, uc010mtz.2, uc010mua.1_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | B3KQM1Q4LDE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.44e-09 | 5 |
fibroblast of gingiva | 3.37e-09 | 5 |
adipocyte of omentum tissue | 6.75e-09 | 3 |
fat cell | 3.34e-08 | 15 |
fibroblast | 4.65e-08 | 76 |
outer root sheath cell | 4.42e-07 | 2 |
annulus pulposus cell | 7.23e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.58e-11 | 6 |
peritoneum | 5.58e-11 | 6 |
abdominal cavity | 5.58e-11 | 6 |
visceral peritoneum | 5.58e-11 | 6 |
cavity lining | 1.86e-10 | 12 |
serous membrane | 1.86e-10 | 12 |
hair follicle | 1.44e-09 | 5 |
hair follicle placode | 1.44e-09 | 5 |
articulation | 2.81e-09 | 8 |
skeletal joint | 2.81e-09 | 8 |
articular system | 2.81e-09 | 8 |
organ component layer | 4.21e-09 | 66 |
subdivision of skeletal system | 1.34e-07 | 16 |
hair root sheath | 4.42e-07 | 2 |
hair outer root sheath | 4.42e-07 | 2 |
bulb of hair follicle | 4.42e-07 | 2 |
annulus fibrosus | 7.23e-07 | 2 |
fibrocartilage | 7.23e-07 | 2 |
annulus fibrosus disci intervertebralis | 7.23e-07 | 2 |
perirenal fat | 9.34e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.08e-07 | 2 |