FFCP PHASE1:Hg19::chr4:102268331..102268342,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5530 | |EntrezGene=5530 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9314 | |HGNC=9314 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_ENST00000394853_5end | |association_with_transcript=141bp_to_ENST00000394853_5end | ||
|cluster_id=chr4:102268331..102268342,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_4_at_PPP3CA_5end | |description=CAGE_peak_4_at_PPP3CA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!4.55e-07!140 | |ontology_enrichment_celltype=CL:0000738!4.55e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.56e-08;5!CL:0000840;8.14e-07;5 | |ontology_enrichment_celltype_v019=CL:0000097;3.56e-08;5!CL:0000840;8.14e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.52e-08,5;CL:0002028,2.52e-08,5;CL:0000840,4.91e-07,5;CL:0001029,4.91e-07,5;CL:0000738,9.28e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.53e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;7.53e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;9.60e-36;32!UBERON:0001893;1.57e-34;34!UBERON:0002791;3.12e-33;32!UBERON:0002619;9.06e-33;22!UBERON:0003528;2.71e-32;34!UBERON:0002020;2.71e-32;34!UBERON:0002780;4.27e-32;41!UBERON:0001890;4.27e-32;41!UBERON:0001950;2.18e-29;20!UBERON:0000956;3.67e-28;25!UBERON:0000203;3.67e-28;25!UBERON:0000073;1.92e-25;53!UBERON:0002616;1.92e-25;53!UBERON:0000955;2.30e-17;68!UBERON:0001017;4.72e-15;75!UBERON:0002420;1.21e-13;9!UBERON:0007245;1.21e-13;9!UBERON:0010009;1.21e-13;9!UBERON:0010011;1.21e-13;9!UBERON:0000454;1.21e-13;9!UBERON:0001016;8.67e-13;83!UBERON:0000200;4.14e-12;6!UBERON:0009663;1.75e-10;7!UBERON:0000125;3.26e-10;9!UBERON:0002308;3.26e-10;9!UBERON:0000349;4.47e-10;5!UBERON:0002021;9.24e-10;5!UBERON:0001872;1.21e-09;5!UBERON:0000369;3.97e-09;4!UBERON:0002435;3.97e-09;4!UBERON:0000204;3.97e-09;4!UBERON:0002784;2.39e-08;4!UBERON:0007023;2.89e-08;114!UBERON:0005383;2.91e-07;3!UBERON:0005382;2.91e-07;3!UBERON:0001894;4.22e-07;7!UBERON:0001871;5.96e-07;6!UBERON:0001870;6.11e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001869;9.60e-36;32!UBERON:0001893;1.57e-34;34!UBERON:0002791;3.12e-33;32!UBERON:0002619;9.06e-33;22!UBERON:0003528;2.71e-32;34!UBERON:0002020;2.71e-32;34!UBERON:0002780;4.27e-32;41!UBERON:0001890;4.27e-32;41!UBERON:0001950;2.18e-29;20!UBERON:0000956;3.67e-28;25!UBERON:0000203;3.67e-28;25!UBERON:0000073;1.92e-25;53!UBERON:0002616;1.92e-25;53!UBERON:0000955;2.30e-17;68!UBERON:0001017;4.72e-15;75!UBERON:0002420;1.21e-13;9!UBERON:0007245;1.21e-13;9!UBERON:0010009;1.21e-13;9!UBERON:0010011;1.21e-13;9!UBERON:0000454;1.21e-13;9!UBERON:0001016;8.67e-13;83!UBERON:0000200;4.14e-12;6!UBERON:0009663;1.75e-10;7!UBERON:0000125;3.26e-10;9!UBERON:0002308;3.26e-10;9!UBERON:0000349;4.47e-10;5!UBERON:0002021;9.24e-10;5!UBERON:0001872;1.21e-09;5!UBERON:0000369;3.97e-09;4!UBERON:0002435;3.97e-09;4!UBERON:0000204;3.97e-09;4!UBERON:0002784;2.39e-08;4!UBERON:0007023;2.89e-08;114!UBERON:0005383;2.91e-07;3!UBERON:0005382;2.91e-07;3!UBERON:0001894;4.22e-07;7!UBERON:0001871;5.96e-07;6!UBERON:0001870;6.11e-07;3 | ||
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| ||
|short_description=p4@PPP3CA | |short_description=p4@PPP3CA | ||
}} | }} |
Latest revision as of 03:13, 20 September 2015
Short description: | p4@PPP3CA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PPP3CA_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 141bp_to_ENST00000394853_5end |
EntrezGene: | PPP3CA |
HGNC: | 9314 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.52e-08 | 5 |
basophil mast progenitor cell | 2.52e-08 | 5 |
immature conventional dendritic cell | 4.91e-07 | 5 |
common dendritic progenitor | 4.91e-07 | 5 |
leukocyte | 9.28e-07 | 136 |