FFCP PHASE1:Hg19::chr12:6881662..6881675,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6881662..6881675,+ to FFCP PHASE1:Hg19::chr12:6881662..6881675,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt=P18627,Q7Z643 | |UniProt=P18627,Q7Z643 | ||
|association_with_transcript=0bp_to_NM_002286,uc001qqs.2,uc001qqt.3_5end | |||
|cluster_id=chr12:6881662..6881675,+ | |||
|coexpression_cluster_id=C2233 | |||
|description=CAGE_peak_2_at_LAG3_5end | |||
|id=chr12:6881662..6881675,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.08e-19!18;CL:0000789!1.08e-19!18;CL:0002420!1.08e-19!18;CL:0002419!1.08e-19!18;CL:0000790!1.08e-19!18;CL:0000542!2.47e-15!53;CL:0000051!2.47e-15!53;CL:0000625!5.81e-15!11;CL:0000838!9.05e-15!52;CL:0000084!2.11e-14!25;CL:0000827!2.11e-14!25;CL:0000738!7.67e-09!140;CL:0002087!2.33e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.78e-36;18!CL:0000789;1.78e-36;18!CL:0002419;1.78e-36;18!CL:0000625;7.81e-30;11!CL:0000084;1.02e-28;25!CL:0000542;2.34e-13;53!CL:0000623;3.10e-09;3!CL:0000624;4.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.41e-37,18;CL:0000789,7.41e-37,18;CL:0002420,7.41e-37,18;CL:0002419,7.41e-37,18;CL:0000790,7.41e-37,18;CL:0000625,4.33e-30,11;CL:0000084,5.32e-29,25;CL:0000827,5.32e-29,25;CL:0000838,3.14e-28,52;CL:0000542,1.46e-27,53;CL:0000051,1.46e-27,53;CL:0002087,5.27e-13,115;CL:0000738,9.16e-12,136;CL:0002031,3.92e-10,120;CL:0000623,2.59e-09,3;CL:0000825,2.59e-09,3;CL:0000037,6.96e-09,168;CL:0000988,4.72e-08,177;CL:0002032,4.99e-08,161;CL:0000837,4.99e-08,161;CL:0000624,3.71e-07,6;CL:0000893,6.60e-07,2;CL:0002489,6.60e-07,2;CL:0000809,6.60e-07,2;CL:0000808,6.60e-07,2;CL:0000894,6.60e-07,2;CL:0000806,6.60e-07,2;CL:0000807,6.60e-07,2;CL:0000805,6.60e-07,2;CL:0002425,6.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-36;18!CL:0000051;2.34e-13;53!CL:0002425;9.98e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-29!115;UBERON:0000178!3.49e-07!15;UBERON:0000179!3.49e-07!15;UBERON:0000463!3.49e-07!15;UBERON:0004177!6.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.74e-10;15!UBERON:0000179;3.74e-10;15!UBERON:0000463;3.74e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.20e-10,15;UBERON:0000179,3.20e-10,15;UBERON:0000463,3.20e-10,15;UBERON:0004177,7.30e-07,7;UBERON:0005057,7.30e-07,7;UBERON:0007023,9.18e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86395506676235,4.92603536699674,6.37557328640802,1.18009283054671,4.22212337906934,0.154816123316076,0,0,0,0,0,0.880801318004542,0.553995408531877,0.601633342410425,0,0.671746422719773,1.6194683300949,1.54545340580512,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,1.05353633910031,0.393419540227666,1.57204305099666,1.43921049299656,0.83593247695339,0,0,0,11.1410456885174,1.47302953737419,1.10766947291811,2.43723477388514,18.8294239996742,20.9395549571404,2.13769275984779,0.276350017785848,0.869409257205157,0.296573126324121,0,0,2.03956816855619,1.91610246800961,2.06176467289578,2.02415753615602,3.18565414324097,1.95325036156926,2.85135613334512,2.71035214339991,4.99147783502232,1.24930726552346,3.78843603270427,6.56902397536837,6.04820229674197,5.08136371988664,3.33096128930438,0,0,0,0,0,0.144846518960824,1.5905718941022,2.43317435151318,0,0,0,1.24430121722827,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.199748103411,3.15249216323084,5.39068937148793,1.66845947163673,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.86091223510599,0.862856803274467,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,1.70894156152249,1.19115887728894,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,2.87796022262726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,9.36124427930818,0,0,0,0,0,0.140669416410513,0,0,2.74463030566391,1.39473591775749,5.52567831062295,0,0,4.67722260752064,0,0,0,0,1.08507746200627,9.57932369387759,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,3.15496059865568,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,1.31897010310274,0,0.129282956361551,0.39669780522807,0,0,1.60181118851542,0,0.828478110694391,1.48849806543585,16.2041538156314,0.487170393523584,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,5.56556429784504,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.60710550763486,3.36283722218824,0,0.455324382702595,0.177404740325278,0.576169937778896,0,0.135939465953663,0,0,0,0.706437835654626,0,0,0,0,0,0.428859265059938,0,0.697448552208751,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,2.31522474323834,0.655678681511872,0,0,0,0,0.297046400327086,0,0,6.20293858667034,1.74036297528658,0,0,0,0,0,0.917458566809082,0,0,0.135982980381829,0,0,0,0.924351257262837,0,0,0,0.126698501011437,0,0,0,0,1.36401656792831,0.535928260312357,0,0.103432995861895,1.27940389140589,0,0.904244737704086,0.744896571550295,0,0.0636471582781649,0,0,0,4.04112318087525,0.932388670104793,0,0,0,0,0,0,2.2003459952916,0,0,1.81146414231924,4.80852738454849 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86395506676235,4.92603536699674,6.37557328640802,1.18009283054671,4.22212337906934,0.154816123316076,0,0,0,0,0,0.880801318004542,0.553995408531877,0.601633342410425,0,0.671746422719773,1.6194683300949,1.54545340580512,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,1.05353633910031,0.393419540227666,1.57204305099666,1.43921049299656,0.83593247695339,0,0,0,11.1410456885174,1.47302953737419,1.10766947291811,2.43723477388514,18.8294239996742,20.9395549571404,2.13769275984779,0.276350017785848,0.869409257205157,0.296573126324121,0,0,2.03956816855619,1.91610246800961,2.06176467289578,2.02415753615602,3.18565414324097,1.95325036156926,2.85135613334512,2.71035214339991,4.99147783502232,1.24930726552346,3.78843603270427,6.56902397536837,6.04820229674197,5.08136371988664,3.33096128930438,0,0,0,0,0,0.144846518960824,1.5905718941022,2.43317435151318,0,0,0,1.24430121722827,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.199748103411,3.15249216323084,5.39068937148793,1.66845947163673,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.86091223510599,0.862856803274467,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,1.70894156152249,1.19115887728894,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,2.87796022262726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,9.36124427930818,0,0,0,0,0,0.140669416410513,0,0,2.74463030566391,1.39473591775749,5.52567831062295,0,0,4.67722260752064,0,0,0,0,1.08507746200627,9.57932369387759,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,3.15496059865568,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,1.31897010310274,0,0.129282956361551,0.39669780522807,0,0,1.60181118851542,0,0.828478110694391,1.48849806543585,16.2041538156314,0.487170393523584,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,5.56556429784504,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.60710550763486,3.36283722218824,0,0.455324382702595,0.177404740325278,0.576169937778896,0,0.135939465953663,0,0,0,0.706437835654626,0,0,0,0,0,0.428859265059938,0,0.697448552208751,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,2.31522474323834,0.655678681511872,0,0,0,0,0.297046400327086,0,0,6.20293858667034,1.74036297528658,0,0,0,0,0,0.917458566809082,0,0,0.135982980381829,0,0,0,0.924351257262837,0,0,0,0.126698501011437,0,0,0,0,1.36401656792831,0.535928260312357,0,0.103432995861895,1.27940389140589,0,0.904244737704086,0.744896571550295,0,0.0636471582781649,0,0,0,4.04112318087525,0.932388670104793,0,0,0,0,0,0,2.2003459952916,0,0,1.81146414231924,4.80852738454849 | ||
|short_description=p2@LAG3 | |||
}} | }} |
Latest revision as of 03:11, 20 September 2015
Short description: | p2@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAG3_5end |
Coexpression cluster: | C2233_CD4_NK_spleen_adult_lymphangiectasia_appendix_CD8 |
Association with transcript: | 0bp_to_NM_002286, uc001qqs.2, uc001qqt.3_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | P18627Q7Z643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.20e-10 | 15 |
haemolymphatic fluid | 3.20e-10 | 15 |
organism substance | 3.20e-10 | 15 |
hemopoietic organ | 7.30e-07 | 7 |
immune organ | 7.30e-07 | 7 |
adult organism | 9.18e-07 | 114 |