FFCP PHASE1:Hg19::chr2:216256725..216256736,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=269bp_to_uc002vez.2_5end | |association_with_transcript=269bp_to_uc002vez.2_5end | ||
|cluster_id=chr2:216256725..216256736,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_74_at_FN1_5end | |description=CAGE_peak_74_at_FN1_5end | ||
|id=chr2:216256725..216256736,- | |id=chr2:216256725..216256736,- | ||
|ontology_enrichment_celltype=CL:0000057!1.35e-16!75;CL:0000055!4.41e-15!180;CL:0002620!4.41e-12!23;CL:0000048!1.60e-09!430;CL:0000723!2.99e-09!436;CL:0000034!8.43e-09!444;CL:0002371!7.31e-07!591 | |ontology_enrichment_celltype=CL:0000057!1.35e-16!75;CL:0000055!4.41e-15!180;CL:0002620!4.41e-12!23;CL:0000048!1.60e-09!430;CL:0000723!2.99e-09!436;CL:0000034!8.43e-09!444;CL:0002371!7.31e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000680;4.01e-11;7!CL:0000134;4.39e-11;55!CL:0000594;7.10e-10;3!CL:0000723;1.38e-09;61!CL:0000048;3.58e-08;58!CL:0000034;4.56e-08;69!CL:0002620;8.24e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,5.50e-10,3;CL:0000057,4.33e-09,76;CL:0002620,1.00e-07,23;CL:0000048,4.54e-07,427;CL:0000723,8.07e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.76e-07!14 | |ontology_enrichment_disease=DOID:2394!2.76e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!8.52e-10!40;UBERON:0002199!1.86e-09!45;UBERON:0002416!1.86e-09!45;UBERON:0000914!2.13e-07!83;UBERON:0002329!2.13e-07!83;UBERON:0003077!2.13e-07!83;UBERON:0003059!2.13e-07!83;UBERON:0007282!2.13e-07!83;UBERON:0009618!2.13e-07!83;UBERON:0007285!2.13e-07!83;UBERON:0004290!3.44e-07!70;UBERON:0005256!8.63e-07!143 | |ontology_enrichment_uberon=UBERON:0002097!8.52e-10!40;UBERON:0002199!1.86e-09!45;UBERON:0002416!1.86e-09!45;UBERON:0000914!2.13e-07!83;UBERON:0002329!2.13e-07!83;UBERON:0003077!2.13e-07!83;UBERON:0003059!2.13e-07!83;UBERON:0007282!2.13e-07!83;UBERON:0009618!2.13e-07!83;UBERON:0007285!2.13e-07!83;UBERON:0004290!3.44e-07!70;UBERON:0005256!8.63e-07!143 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-07,371;UBERON:0002097,2.77e-07,41 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,7.29952305453954,0.189069634328136,0.886917589850256,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,2.51577443545116,1.43418310374407,0,0,1.06748995729705,0,0.311211035399766,0,1.14423332179421,0.454072282934794,1.72852777344,0.234321431833797,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,0,0.600952235626387,0,1.07633781413317,0.640672166455702,1.48352330811693,3.00091096084402,0.103052529238439,1.8034837803194,1.11670113798954,2.02531598689519,0.68205903612839,2.27190396819703,0.828449087780694,0,2.13005755509969,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,1.91699884393266,0,0,1.01346914667305,2.26023954805422,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32753378449291,2.85486382075459,0.473107245101804,1.05427273493442,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.2276957863045,0.280660094433074,0,0,0.965123526861645,1.48418066444991,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.770243085573222,0.921022048356777,0.689182862422653,1.82614416276065,1.45016693914229,1.10794615640931,0.0890320356467374,0,0,2.67986696238627,0,0.464845549297286,3.1481234683064,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0.899362287916574,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,1.31717957183961,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.890894042497916,0.921482106297696,0,0.140669416410513,3.11664374064136,0,0,0.398495976502139,0,0,0,0,5.90975216557434,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,5.74202087517455,0.457987967009312,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.134366944973453,2.16179930125442,0,0.315132729228895,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,2.89659637035217,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.74627401443437,1.16856654923612,1.66441758450784,1.32582103692562,1.76097531226803,1.77962244319307,0.228840068396924,1.81477108515887,0.777186002913902,0.591420599958536,0,0.449803112163605,0.310525913752519,1.24411862352257,2.12673371646396,1.5652351854352,0.150257608997218,1.14241563650639,0.406870733204662,0.363697318405119,0.322231671127465,0,2.3885753321917,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,1.88719130227076,0,0.169732529954025,0.425149840203366,0.371807292777007,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,0,0.49131575253029,0,0,0,0,0,0,0,0,1.93458368795583,0,0,0,0.606965604236632,0,0.177404740325278,0,0.857440047187092,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=1.09007027562334,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,7.29952305453954,0.189069634328136,0.886917589850256,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,2.51577443545116,1.43418310374407,0,0,1.06748995729705,0,0.311211035399766,0,1.14423332179421,0.454072282934794,1.72852777344,0.234321431833797,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,0,0.600952235626387,0,1.07633781413317,0.640672166455702,1.48352330811693,3.00091096084402,0.103052529238439,1.8034837803194,1.11670113798954,2.02531598689519,0.68205903612839,2.27190396819703,0.828449087780694,0,2.13005755509969,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,1.91699884393266,0,0,1.01346914667305,2.26023954805422,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32753378449291,2.85486382075459,0.473107245101804,1.05427273493442,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.2276957863045,0.280660094433074,0,0,0.965123526861645,1.48418066444991,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.770243085573222,0.921022048356777,0.689182862422653,1.82614416276065,1.45016693914229,1.10794615640931,0.0890320356467374,0,0,2.67986696238627,0,0.464845549297286,3.1481234683064,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0.899362287916574,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,1.31717957183961,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.890894042497916,0.921482106297696,0,0.140669416410513,3.11664374064136,0,0,0.398495976502139,0,0,0,0,5.90975216557434,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,5.74202087517455,0.457987967009312,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.134366944973453,2.16179930125442,0,0.315132729228895,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,2.89659637035217,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.74627401443437,1.16856654923612,1.66441758450784,1.32582103692562,1.76097531226803,1.77962244319307,0.228840068396924,1.81477108515887,0.777186002913902,0.591420599958536,0,0.449803112163605,0.310525913752519,1.24411862352257,2.12673371646396,1.5652351854352,0.150257608997218,1.14241563650639,0.406870733204662,0.363697318405119,0.322231671127465,0,2.3885753321917,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,1.88719130227076,0,0.169732529954025,0.425149840203366,0.371807292777007,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,0,0.49131575253029,0,0,0,0,0,0,0,0,1.93458368795583,0,0,0,0.606965604236632,0,0.177404740325278,0,0.857440047187092,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p74@FN1 | |short_description=p74@FN1 | ||
}} | }} |
Latest revision as of 03:06, 20 September 2015
Short description: | p74@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_74_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 269bp_to_uc002vez.2_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 5.50e-10 | 3 |
fibroblast | 4.33e-09 | 76 |
skin fibroblast | 1.00e-07 | 23 |
multi fate stem cell | 4.54e-07 | 427 |
somatic stem cell | 8.07e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.76e-07 | 371 |
skin of body | 2.77e-07 | 41 |