FFCP PHASE1:Hg19::chr6:89791507..89791559,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:89791507..89791559,+
|short_description=p4@PNRC1
|description=CAGE_peak_4_at_PNRC1_5end
|association_with_transcript=0bp_to_uc003pmx.2_5end
|EntrezGene=10...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10957 | |EntrezGene=10957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17278 | |HGNC=17278 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003pmx.2_5end | |||
|cluster_id=chr6:89791507..89791559,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_PNRC1_5end | |||
|id=chr6:89791507..89791559,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.28e-15!42;CL:0000860!6.51e-14!45;CL:0000766!2.44e-13!76;CL:0000557!8.80e-11!71;CL:0000839!3.91e-10!70;CL:0000763!8.04e-10!112;CL:0000049!8.04e-10!112;CL:0002009!1.59e-09!65;CL:0002194!1.13e-08!63;CL:0000576!1.13e-08!63;CL:0000040!1.13e-08!63;CL:0000559!1.13e-08!63;CL:0000738!6.17e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.58e-15;33!CL:0002057;7.58e-15;33!CL:0000473;1.09e-11;39!CL:0000234;1.09e-11;39!CL:0000576;1.53e-09;48!CL:0000766;5.93e-09;69!CL:0000094;2.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.29e-18,72;CL:0000860,5.23e-17,42;CL:0002057,5.23e-17,42;CL:0000473,5.85e-16,48;CL:0000234,5.85e-16,48;CL:0000557,6.77e-15,67;CL:0000839,5.24e-14,66;CL:0000763,1.94e-13,108;CL:0000049,1.94e-13,108;CL:0000738,1.96e-13,136;CL:0002009,3.96e-13,61;CL:0002194,5.76e-12,59;CL:0000576,5.76e-12,59;CL:0000040,5.76e-12,59;CL:0000559,5.76e-12,59;CL:0000037,8.89e-11,168;CL:0002032,2.45e-10,161;CL:0000837,2.45e-10,161;CL:0002031,2.56e-10,120;CL:0000988,1.63e-09,177;CL:0002087,5.36e-08,115;CL:0000094,1.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.74e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.09e-10!80;UBERON:0001474!6.79e-10!86;UBERON:0004765!6.16e-08!101;UBERON:0001434!6.16e-08!101;UBERON:0002390!1.02e-07!102;UBERON:0003061!1.02e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.21e-14,82;UBERON:0002371,8.55e-14,76;UBERON:0004765,4.55e-13,90;UBERON:0001434,4.17e-10,100;UBERON:0002390,8.50e-10,98;UBERON:0003061,8.50e-10,98;UBERON:0002405,5.96e-09,93;UBERON:0002193,2.98e-07,108 | |||
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| ||
|short_description=p4@PNRC1 | |||
}} | }} |
Latest revision as of 03:02, 20 September 2015
Short description: | p4@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PNRC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_uc003pmx.2_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.29e-18 | 72 |
classical monocyte | 5.23e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-17 | 42 |
defensive cell | 5.85e-16 | 48 |
phagocyte | 5.85e-16 | 48 |
granulocyte monocyte progenitor cell | 6.77e-15 | 67 |
myeloid lineage restricted progenitor cell | 5.24e-14 | 66 |
myeloid cell | 1.94e-13 | 108 |
common myeloid progenitor | 1.94e-13 | 108 |
leukocyte | 1.96e-13 | 136 |
macrophage dendritic cell progenitor | 3.96e-13 | 61 |
monopoietic cell | 5.76e-12 | 59 |
monocyte | 5.76e-12 | 59 |
monoblast | 5.76e-12 | 59 |
promonocyte | 5.76e-12 | 59 |
hematopoietic stem cell | 8.89e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.45e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.56e-10 | 120 |
hematopoietic cell | 1.63e-09 | 177 |
nongranular leukocyte | 5.36e-08 | 115 |
granulocyte | 1.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone element | 6.21e-14 | 82 |
bone marrow | 8.55e-14 | 76 |
skeletal element | 4.55e-13 | 90 |
skeletal system | 4.17e-10 | 100 |
hematopoietic system | 8.50e-10 | 98 |
blood island | 8.50e-10 | 98 |
immune system | 5.96e-09 | 93 |
hemolymphoid system | 2.98e-07 | 108 |