FFCP PHASE1:Hg19::chr3:124732162..124732179,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:124732162..124732179,-
|short_description=p9@HEG1
|description=CAGE_peak_9_at_HEG1_5end
|association_with_transcript=200bp_to_BC067235_5end
|EntrezGene=57...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57493 | |EntrezGene=57493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29227 | |HGNC=29227 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULI3 | |UniProt=Q9ULI3 | ||
|association_with_transcript=200bp_to_BC067235_5end | |||
|cluster_id=chr3:124732162..124732179,- | |||
|coexpression_cluster_id=C769 | |||
|description=CAGE_peak_9_at_HEG1_5end | |||
|id=chr3:124732162..124732179,- | |||
|ontology_enrichment_celltype=CL:0000055!9.09e-14!180;CL:0000057!2.87e-09!75;CL:0000192!8.66e-09!42;CL:0000514!8.66e-09!42;CL:0000222!9.50e-09!119;CL:0000187!2.00e-08!54;CL:0000680!3.46e-08!57;CL:0000056!3.46e-08!57;CL:0000355!3.46e-08!57;CL:0000393!4.17e-08!60;CL:0000211!4.17e-08!60;CL:0000359!2.09e-07!32;CL:0000183!3.01e-07!59;CL:0002334!4.12e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.91e-13;19!CL:0002334;1.30e-10;12!CL:0000134;6.48e-08;55!CL:0002494;4.77e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,8.84e-13,19;CL:0000057,1.44e-11,76;CL:0002334,1.89e-10,12;CL:0000048,6.49e-08,427;CL:0000723,1.72e-07,433;CL:0000034,5.92e-07,441;CL:0002494,5.95e-07,16;CL:0000222,6.32e-07,121;CL:1000306,9.38e-07,4;CL:0002547,9.38e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.27e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.68e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.37e-09!84;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0000490!3.23e-08!138;UBERON:0002385!3.33e-08!63;UBERON:0001015!3.33e-08!63;UBERON:0000383!3.33e-08!63;UBERON:0004290!1.47e-07!70;UBERON:0001009!3.08e-07!113;UBERON:0004573!3.96e-07!33;UBERON:0004571!3.96e-07!33;UBERON:0001981!4.29e-07!60;UBERON:0007500!4.29e-07!60;UBERON:0004537!4.29e-07!60;UBERON:0006965!4.29e-07!60;UBERON:0002049!4.48e-07!79;UBERON:0007798!4.48e-07!79;UBERON:0001637!4.58e-07!42;UBERON:0003509!4.58e-07!42;UBERON:0004572!4.58e-07!42;UBERON:0000947!5.45e-07!21;UBERON:0010191!5.45e-07!21;UBERON:0004535!6.28e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.94e-12;9!UBERON:0000042;9.94e-12;9!UBERON:0003688;1.75e-10;6!UBERON:0002358;1.75e-10;6!UBERON:0003684;1.75e-10;6!UBERON:0001178;1.75e-10;6!UBERON:0005631;2.86e-07;10!UBERON:0000158;2.86e-07;10!UBERON:0000948;8.78e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.39e-10,6;UBERON:0002358,1.39e-10,6;UBERON:0003684,1.39e-10,6;UBERON:0001178,1.39e-10,6;UBERON:0004457,2.58e-08,12;UBERON:0000042,2.58e-08,12;UBERON:0004797,1.86e-07,7;UBERON:0004923,1.94e-07,66;UBERON:0004872,2.73e-07,83;UBERON:0000948,4.04e-07,24;UBERON:0005498,4.04e-07,24;UBERON:0004140,4.04e-07,24;UBERON:0009881,4.04e-07,24;UBERON:0004141,4.04e-07,24;UBERON:0003084,4.04e-07,24;UBERON:0007005,4.04e-07,24;UBERON:0004139,4.04e-07,24;UBERON:0004291,4.04e-07,24;UBERON:0000415,9.38e-07,4;UBERON:0007240,9.38e-07,4;UBERON:0005742,9.38e-07,4;UBERON:0005734,9.38e-07,4;UBERON:0004664,9.38e-07,4;UBERON:0004663,9.38e-07,4 | |||
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| ||
|short_description=p9@HEG1 | |||
}} | }} |
Latest revision as of 02:55, 20 September 2015
Short description: | p9@HEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HEG1_5end |
Coexpression cluster: | C769_Fibroblast_Sertoli_Smooth_Mesothelial_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | 200bp_to_BC067235_5end |
EntrezGene: | HEG1 |
HGNC: | 29227 |
UniProt: | Q9ULI3 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.84e-13 | 19 |
fibroblast | 1.44e-11 | 76 |
preadipocyte | 1.89e-10 | 12 |
multi fate stem cell | 6.49e-08 | 427 |
somatic stem cell | 1.72e-07 | 433 |
stem cell | 5.92e-07 | 441 |
cardiocyte | 5.95e-07 | 16 |
mesodermal cell | 6.32e-07 | 121 |
fibroblast of tunica adventitia of artery | 9.38e-07 | 4 |
fibroblast of the aortic adventitia | 9.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.39e-10 | 6 |
peritoneum | 1.39e-10 | 6 |
abdominal cavity | 1.39e-10 | 6 |
visceral peritoneum | 1.39e-10 | 6 |
cavity lining | 2.58e-08 | 12 |
serous membrane | 2.58e-08 | 12 |
blood vessel layer | 1.86e-07 | 7 |
organ component layer | 1.94e-07 | 66 |
splanchnic layer of lateral plate mesoderm | 2.73e-07 | 83 |
heart | 4.04e-07 | 24 |
primitive heart tube | 4.04e-07 | 24 |
primary heart field | 4.04e-07 | 24 |
anterior lateral plate mesoderm | 4.04e-07 | 24 |
heart tube | 4.04e-07 | 24 |
heart primordium | 4.04e-07 | 24 |
cardiac mesoderm | 4.04e-07 | 24 |
cardiogenic plate | 4.04e-07 | 24 |
heart rudiment | 4.04e-07 | 24 |
artery wall | 9.38e-07 | 4 |
tunica adventitia of artery | 9.38e-07 | 4 |
adventitia | 9.38e-07 | 4 |
tunica adventitia of blood vessel | 9.38e-07 | 4 |
aorta tunica adventitia | 9.38e-07 | 4 |
aorta wall | 9.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.68e-09 | 14 |