FFCP PHASE1:Hg19::chr6:89790156..89790161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10957 | |EntrezGene=10957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17278 | |HGNC=17278 | ||
|TSSclassifier=strong | |||
|UniProt=Q12796 | |UniProt=Q12796 | ||
|association_with_transcript=-267bp_to_NM_006813,uc003pmu.2,uc003pmv.2_5end | |association_with_transcript=-267bp_to_NM_006813,uc003pmu.2,uc003pmv.2_5end | ||
|cluster_id=chr6:89790156..89790161,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_29_at_PNRC1_5end | |description=CAGE_peak_29_at_PNRC1_5end | ||
|id=chr6:89790156..89790161,+ | |id=chr6:89790156..89790161,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.83e-37!45;CL:0002057!5.67e-37!42;CL:0002194!1.21e-28!63;CL:0000576!1.21e-28!63;CL:0000040!1.21e-28!63;CL:0000559!1.21e-28!63;CL:0002009!1.47e-27!65;CL:0000839!4.12e-25!70;CL:0000557!1.16e-24!71;CL:0000766!1.34e-22!76;CL:0002087!2.61e-14!119;CL:0000763!3.38e-13!112;CL:0000049!3.38e-13!112;CL:0002031!2.39e-12!124;CL:0000738!4.04e-11!140;CL:0000037!8.16e-08!172;CL:0000566!8.16e-08!172;CL:0002032!1.13e-07!165;CL:0000837!1.13e-07!165;CL:0000988!4.91e-07!182 | |ontology_enrichment_celltype=CL:0000860!4.83e-37!45;CL:0002057!5.67e-37!42;CL:0002194!1.21e-28!63;CL:0000576!1.21e-28!63;CL:0000040!1.21e-28!63;CL:0000559!1.21e-28!63;CL:0002009!1.47e-27!65;CL:0000839!4.12e-25!70;CL:0000557!1.16e-24!71;CL:0000766!1.34e-22!76;CL:0002087!2.61e-14!119;CL:0000763!3.38e-13!112;CL:0000049!3.38e-13!112;CL:0002031!2.39e-12!124;CL:0000738!4.04e-11!140;CL:0000037!8.16e-08!172;CL:0000566!8.16e-08!172;CL:0002032!1.13e-07!165;CL:0000837!1.13e-07!165;CL:0000988!4.91e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-67;33!CL:0002057;1.36e-67;33!CL:0000473;2.18e-48;39!CL:0000234;2.18e-48;39!CL:0000576;2.55e-27;48!CL:0000766;5.13e-20;69!CL:0002087;3.89e-14;104!CL:0000763;7.60e-13;100!CL:0000738;4.80e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.93e-60,42;CL:0002057,4.93e-60,42;CL:0000473,1.96e-52,48;CL:0000234,1.96e-52,48;CL:0002194,8.73e-42,59;CL:0000576,8.73e-42,59;CL:0000040,8.73e-42,59;CL:0000559,8.73e-42,59;CL:0002009,2.07e-40,61;CL:0000839,2.48e-37,66;CL:0000557,9.06e-37,67;CL:0000766,3.43e-34,72;CL:0000763,1.37e-22,108;CL:0000049,1.37e-22,108;CL:0002087,3.64e-21,115;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.00e-40;42!CL:0000049;1.12e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.92e-21!80;UBERON:0002405!9.84e-21!115;UBERON:0001474!3.44e-19!86;UBERON:0002390!6.96e-18!102;UBERON:0003061!6.96e-18!102;UBERON:0002193!6.28e-17!112;UBERON:0004765!1.02e-16!101;UBERON:0001434!1.02e-16!101;UBERON:0002204!9.76e-12!167;UBERON:0003081!2.39e-07!216;UBERON:0000926!3.26e-07!448;UBERON:0004120!3.26e-07!448;UBERON:0006603!3.26e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!3.92e-21!80;UBERON:0002405!9.84e-21!115;UBERON:0001474!3.44e-19!86;UBERON:0002390!6.96e-18!102;UBERON:0003061!6.96e-18!102;UBERON:0002193!6.28e-17!112;UBERON:0004765!1.02e-16!101;UBERON:0001434!1.02e-16!101;UBERON:0002204!9.76e-12!167;UBERON:0003081!2.39e-07!216;UBERON:0000926!3.26e-07!448;UBERON:0004120!3.26e-07!448;UBERON:0006603!3.26e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-32,76;UBERON:0001474,5.79e-30,82;UBERON:0004765,3.01e-27,90;UBERON:0002405,2.39e-26,93;UBERON:0002390,5.72e-25,98;UBERON:0003061,5.72e-25,98;UBERON:0001434,1.87e-24,100;UBERON:0002193,1.37e-22,108;UBERON:0002204,2.75e-14,167;UBERON:0003081,1.45e-11,203;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0.242584061187816,0.929716147622738,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,3.10271112662957,1.29096936716765,4.06279459783025,0.564727018627814,0.818718450173537,1.12361742222542,2.75475503133812,3.20929027076094,6.39337125799041,0,0,0,6.09439401120026,7.37600792098482,9.34233373493363,0,0,0.434377689410233,5.44859552370032,2.57794345191295,5.69632297393592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p29@PNRC1 | |short_description=p29@PNRC1 | ||
}} | }} |
Latest revision as of 02:53, 20 September 2015
Short description: | p29@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_PNRC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -267bp_to_NM_006813, uc003pmu.2, uc003pmv.2_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | Q12796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.93e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.93e-60 | 42 |
defensive cell | 1.96e-52 | 48 |
phagocyte | 1.96e-52 | 48 |
monopoietic cell | 8.73e-42 | 59 |
monocyte | 8.73e-42 | 59 |
monoblast | 8.73e-42 | 59 |
promonocyte | 8.73e-42 | 59 |
macrophage dendritic cell progenitor | 2.07e-40 | 61 |
myeloid lineage restricted progenitor cell | 2.48e-37 | 66 |
granulocyte monocyte progenitor cell | 9.06e-37 | 67 |
myeloid leukocyte | 3.43e-34 | 72 |
myeloid cell | 1.37e-22 | 108 |
common myeloid progenitor | 1.37e-22 | 108 |
nongranular leukocyte | 3.64e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-32 | 76 |
bone element | 5.79e-30 | 82 |
skeletal element | 3.01e-27 | 90 |
immune system | 2.39e-26 | 93 |
hematopoietic system | 5.72e-25 | 98 |
blood island | 5.72e-25 | 98 |
skeletal system | 1.87e-24 | 100 |
hemolymphoid system | 1.37e-22 | 108 |
musculoskeletal system | 2.75e-14 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |