FFCP PHASE1:Hg19::chr1:205325850..205325870,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:205325850..205325870,-
|short_description=p2@KLHDC8A
|description=CAGE_peak_2_at_KLHDC8A_5end
|association_with_transcript=45bp_to_ENST00000537168_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5F1 | |UniProt=F5H5F1 | ||
|association_with_transcript=45bp_to_ENST00000537168_5end | |||
|cluster_id=chr1:205325850..205325870,- | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_2_at_KLHDC8A_5end | |||
|id=chr1:205325850..205325870,- | |||
|ontology_enrichment_celltype=CL:0000047!1.22e-11!8;CL:0002319!1.77e-11!25;CL:0002605!4.38e-11!3;CL:0000133!3.32e-08!59;CL:0000128!3.37e-08!7;CL:0000126!3.37e-08!7;CL:0000127!3.37e-08!7;CL:0002453!3.37e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.18e-34;2!CL:0000540;5.37e-12;6!CL:0000404;5.37e-12;6!CL:0002319;3.40e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.46e-33,8;CL:0000540,5.08e-12,6;CL:0000031,5.08e-12,6;CL:0000404,5.08e-12,6;CL:0002319,3.24e-10,25;CL:0000133,7.01e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;5.37e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.04e-27!86;UBERON:0001017!3.16e-27!82;UBERON:0000073!1.77e-26!94;UBERON:0001016!1.77e-26!94;UBERON:0001049!1.42e-22!57;UBERON:0005068!1.42e-22!57;UBERON:0006241!1.42e-22!57;UBERON:0007135!1.42e-22!57;UBERON:0002616!2.09e-19!59;UBERON:0003075!2.18e-19!86;UBERON:0007284!2.18e-19!86;UBERON:0000955!2.27e-19!69;UBERON:0006238!2.27e-19!69;UBERON:0002780!3.52e-19!41;UBERON:0001890!3.52e-19!41;UBERON:0006240!3.52e-19!41;UBERON:0003080!1.23e-18!42;UBERON:0004121!2.49e-18!169;UBERON:0002346!3.02e-18!90;UBERON:0001893!5.00e-18!34;UBERON:0000924!1.05e-17!173;UBERON:0006601!1.05e-17!173;UBERON:0003056!1.13e-16!61;UBERON:0001869!1.16e-16!32;UBERON:0000956!3.66e-16!25;UBERON:0000203!3.66e-16!25;UBERON:0002791!3.77e-16!33;UBERON:0002020!1.37e-15!34;UBERON:0003528!1.37e-15!34;UBERON:0000153!4.60e-13!129;UBERON:0007811!4.60e-13!129;UBERON:0000033!8.72e-13!123;UBERON:0001950!2.22e-11!20;UBERON:0002619!3.02e-10!22;UBERON:0001905!1.97e-08!2;UBERON:0002757!1.97e-08!2;UBERON:0010134!1.97e-08!2;UBERON:0002784!1.97e-08!2;UBERON:0005408!1.97e-08!2;UBERON:0001899!1.97e-08!2;UBERON:0007023!2.20e-08!115;UBERON:0003127!1.43e-07!2;UBERON:0001871!6.42e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.93e-33;2!UBERON:0002757;1.93e-33;2!UBERON:0010134;1.93e-33;2!UBERON:0005408;1.93e-33;2!UBERON:0001899;1.93e-33;2!UBERON:0003296;2.82e-17;4!UBERON:0010133;2.82e-17;4!UBERON:0002784;2.82e-17;4!UBERON:0001894;2.70e-10;7!UBERON:0001016;3.50e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.19e-33,2;UBERON:0002757,3.19e-33,2;UBERON:0010134,3.19e-33,2;UBERON:0005408,3.19e-33,2;UBERON:0001899,3.19e-33,2;UBERON:0001016,3.45e-17,89;UBERON:0003296,3.61e-17,4;UBERON:0010133,3.61e-17,4;UBERON:0002784,3.61e-17,4;UBERON:0001017,1.99e-15,81;UBERON:0001894,3.11e-10,7;UBERON:0006222,3.11e-10,7;UBERON:0004121,1.08e-08,171;UBERON:0000924,1.08e-08,171;UBERON:0006601,1.08e-08,171 | |||
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| ||
|short_description=p2@KLHDC8A | |||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p2@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLHDC8A_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 45bp_to_ENST00000537168_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | F5H5F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.46e-33 | 8 |
neuron | 5.08e-12 | 6 |
neuroblast | 5.08e-12 | 6 |
electrically signaling cell | 5.08e-12 | 6 |
neural cell | 3.24e-10 | 25 |
neurectodermal cell | 7.01e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.19e-33 | 2 |
regional part of epithalamus | 3.19e-33 | 2 |
secretory circumventricular organ | 3.19e-33 | 2 |
circumventricular organ | 3.19e-33 | 2 |
epithalamus | 3.19e-33 | 2 |
nervous system | 3.45e-17 | 89 |
gland of diencephalon | 3.61e-17 | 4 |
neuroendocrine gland | 3.61e-17 | 4 |
regional part of diencephalon | 3.61e-17 | 4 |
central nervous system | 1.99e-15 | 81 |
diencephalon | 3.11e-10 | 7 |
future diencephalon | 3.11e-10 | 7 |
ectoderm-derived structure | 1.08e-08 | 171 |
ectoderm | 1.08e-08 | 171 |
presumptive ectoderm | 1.08e-08 | 171 |