FFCP PHASE1:Hg19::chr12:6875667..6875673,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5763 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9629 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-36bp_to_ENST00000540828_5end | |||
|cluster_id=chr12:6875667..6875673,+ | |||
|description=CAGE_peak_8_at_PTMS_5end | |||
|id=chr12:6875667..6875673,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.17e-23!180;CL:0000222!8.92e-22!119;CL:0000220!2.30e-20!246;CL:0002321!2.75e-20!248;CL:0000115!3.60e-13!35;CL:0000183!8.35e-13!59;CL:0002078!6.89e-12!44;CL:0000548!1.05e-11!679;CL:0000004!1.05e-11!679;CL:0000255!1.05e-11!679;CL:0002139!2.01e-11!24;CL:0000144!2.49e-11!625;CL:0000012!3.29e-11!682;CL:0000680!4.19e-11!57;CL:0000056!4.19e-11!57;CL:0000355!4.19e-11!57;CL:0000187!7.27e-11!54;CL:0002371!1.06e-10!591;CL:0000213!1.26e-10!57;CL:0000215!1.26e-10!57;CL:0000057!6.26e-10!75;CL:0000393!9.16e-10!60;CL:0000211!9.16e-10!60;CL:0000071!1.78e-09!18;CL:0002546!1.78e-09!18;CL:0000066!4.90e-09!254;CL:0000192!1.15e-08!42;CL:0000514!1.15e-08!42;CL:0000359!9.63e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-11;24!CL:0000115;1.50e-11;36!CL:0000071;9.77e-10;18!CL:0002078;7.32e-08;45!CL:0000359;2.86e-07;32!CL:0000213;6.90e-07;58!CL:0000215;6.90e-07;58!CL:0000192;7.92e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.31e-22,121;CL:0002321,1.15e-20,250;CL:0000115,8.85e-14,36;CL:0002078,1.85e-12,45;CL:0002139,1.43e-11,24;CL:0000680,1.98e-11,58;CL:0000056,1.98e-11,58;CL:0000355,1.98e-11,58;CL:0000187,3.47e-11,55;CL:0000213,4.77e-11,58;CL:0000215,4.77e-11,58;CL:0000393,4.56e-10,61;CL:0000211,4.56e-10,61;CL:0000057,1.25e-09,76;CL:0000071,1.35e-09,18;CL:0002546,1.35e-09,18;CL:0000192,5.99e-09,43;CL:0000514,5.99e-09,43;CL:0000066,2.21e-08,253;CL:0000359,7.75e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002546;9.77e-10;18!CL:0000222;2.40e-07;121!CL:0000514;7.92e-07;43!CL:0000355;8.81e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.45e-22!118;UBERON:0002049!1.33e-21!79;UBERON:0007798!1.33e-21!79;UBERON:0004872!7.88e-20!84;UBERON:0000055!2.04e-19!69;UBERON:0002100!8.12e-19!216;UBERON:0005256!2.38e-17!143;UBERON:0001981!1.41e-16!60;UBERON:0007500!1.41e-16!60;UBERON:0004537!1.41e-16!60;UBERON:0006965!1.41e-16!60;UBERON:0004535!6.79e-16!110;UBERON:0001009!2.02e-15!113;UBERON:0003104!7.77e-15!238;UBERON:0009142!7.77e-15!238;UBERON:0000490!9.74e-15!138;UBERON:0000914!2.96e-13!83;UBERON:0002329!2.96e-13!83;UBERON:0003077!2.96e-13!83;UBERON:0003059!2.96e-13!83;UBERON:0007282!2.96e-13!83;UBERON:0009618!2.96e-13!83;UBERON:0007285!2.96e-13!83;UBERON:0000119!3.90e-13!312;UBERON:0000483!2.28e-12!309;UBERON:0004290!2.84e-12!70;UBERON:0000477!1.83e-11!286;UBERON:0001637!3.86e-11!42;UBERON:0003509!3.86e-11!42;UBERON:0004572!3.86e-11!42;UBERON:0000926!6.03e-11!448;UBERON:0004120!6.03e-11!448;UBERON:0006603!6.03e-11!448;UBERON:0000486!6.60e-11!82;UBERON:0000468!1.32e-10!659;UBERON:0002385!1.99e-10!63;UBERON:0001015!1.99e-10!63;UBERON:0000383!1.99e-10!63;UBERON:0001134!2.22e-10!61;UBERON:0002036!2.22e-10!61;UBERON:0003082!2.22e-10!61;UBERON:0000481!2.93e-10!347;UBERON:0000475!8.71e-10!365;UBERON:0004111!1.20e-09!241;UBERON:0001986!1.78e-09!18;UBERON:0004638!1.78e-09!18;UBERON:0004852!1.78e-09!18;UBERON:0000467!2.54e-09!625;UBERON:0000480!2.57e-09!626;UBERON:0009569!4.24e-09!113;UBERON:0000487!4.69e-09!22;UBERON:0001048!6.03e-09!168;UBERON:0000025!3.22e-08!194;UBERON:0006914!4.55e-08!25;UBERON:0003103!1.47e-07!69;UBERON:0000466!2.35e-07!126;UBERON:0004573!3.31e-07!33;UBERON:0004571!3.31e-07!33;UBERON:0003886!7.87e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;4.37e-10;65!UBERON:0007500;4.75e-10;56!UBERON:0001981;4.75e-10;56!UBERON:0004537;4.75e-10;56!UBERON:0004638;9.77e-10;18!UBERON:0001986;9.77e-10;18!UBERON:0004852;9.77e-10;18!UBERON:0002049;1.84e-09;75!UBERON:0007798;1.84e-09;75!UBERON:0000487;3.02e-09;22!UBERON:0003914;3.86e-09;74!UBERON:0001637;5.29e-09;42!UBERON:0003509;5.29e-09;42!UBERON:0004572;5.29e-09;42!UBERON:0006914;4.83e-08;25!UBERON:0000490;1.27e-07;33 | |||
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| |||
|short_description=p8@PTMS | |||
}} |
Latest revision as of 02:40, 20 September 2015
Short description: | p8@PTMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PTMS_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000540828_5end |
EntrezGene: | PTMS |
HGNC: | 9629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.31e-22 | 121 |
embryonic cell | 1.15e-20 | 250 |
endothelial cell | 8.85e-14 | 36 |
meso-epithelial cell | 1.85e-12 | 45 |
endothelial cell of vascular tree | 1.43e-11 | 24 |
muscle precursor cell | 1.98e-11 | 58 |
myoblast | 1.98e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.98e-11 | 58 |
muscle cell | 3.47e-11 | 55 |
lining cell | 4.77e-11 | 58 |
barrier cell | 4.77e-11 | 58 |
electrically responsive cell | 4.56e-10 | 61 |
electrically active cell | 4.56e-10 | 61 |
fibroblast | 1.25e-09 | 76 |
blood vessel endothelial cell | 1.35e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-09 | 18 |
smooth muscle cell | 5.99e-09 | 43 |
smooth muscle myoblast | 5.99e-09 | 43 |
epithelial cell | 2.21e-08 | 253 |
vascular associated smooth muscle cell | 7.75e-08 | 32 |