FFCP PHASE1:Hg19::chr6:118869507..118869518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5350 | |EntrezGene=5350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9080 | |HGNC=9080 | ||
|TSSclassifier=strong | |||
|UniProt=P26678 | |UniProt=P26678 | ||
|association_with_transcript=46bp_to_ENST00000357525_5end | |association_with_transcript=46bp_to_ENST00000357525_5end | ||
|cluster_id=chr6:118869507..118869518,+ | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_3_at_PLN_5end | |description=CAGE_peak_3_at_PLN_5end | ||
|id=chr6:118869507..118869518,+ | |id=chr6:118869507..118869518,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;8.38e-14;65!UBERON:0005062;3.88e-08;4!UBERON:0007284;3.88e-08;4!UBERON:0006965;1.85e-07;2!UBERON:0007297;3.52e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.50e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.41e-54!115;UBERON:0001049!1.70e-09!57;UBERON:0005068!1.70e-09!57;UBERON:0006241!1.70e-09!57;UBERON:0007135!1.70e-09!57;UBERON:0007100!1.47e-08!27;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0003103!3.33e-08!69;UBERON:0002346!7.74e-08!90;UBERON:0000481!9.67e-08!347;UBERON:0004111!1.02e-07!241;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0001017!2.31e-07!82;UBERON:0005743!2.58e-07!86;UBERON:0002616!3.22e-07!59;UBERON:0000477!4.23e-07!286;UBERON:0000025!8.36e-07!194;UBERON:0000062!9.38e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!5.41e-54!115;UBERON:0001049!1.70e-09!57;UBERON:0005068!1.70e-09!57;UBERON:0006241!1.70e-09!57;UBERON:0007135!1.70e-09!57;UBERON:0007100!1.47e-08!27;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0003103!3.33e-08!69;UBERON:0002346!7.74e-08!90;UBERON:0000481!9.67e-08!347;UBERON:0004111!1.02e-07!241;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0001017!2.31e-07!82;UBERON:0005743!2.58e-07!86;UBERON:0002616!3.22e-07!59;UBERON:0000477!4.23e-07!286;UBERON:0000025!8.36e-07!194;UBERON:0000062!9.38e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-13;25!UBERON:0004151;7.54e-11;3!UBERON:0003978;9.75e-11;3!UBERON:0000946;9.75e-11;3!UBERON:0006947;5.49e-10;3!UBERON:0004054;5.49e-10;3!UBERON:0007023;3.18e-09;114!UBERON:0000948;2.51e-08;22!UBERON:0004175;6.65e-08;21!UBERON:0002081;1.16e-07;2!UBERON:0002133;1.37e-07;2!UBERON:0005904;1.39e-07;4!UBERON:0005090;1.50e-07;2!UBERON:0001630;1.50e-07;2!UBERON:0000160;4.14e-07;17!UBERON:0003135;5.36e-07;11!UBERON:0003127;7.56e-07;2!UBERON:0002360;8.02e-07;2!UBERON:0000094;8.02e-07;2!UBERON:0010743;8.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.04e-40,114;UBERON:0003103,1.55e-13,68;UBERON:0007100,1.66e-12,27;UBERON:0004151,7.79e-11,3;UBERON:0003978,1.01e-10,3;UBERON:0009751,1.01e-10,3;UBERON:0000946,1.01e-10,3;UBERON:0002523,1.01e-10,3;UBERON:0005983,1.01e-10,3;UBERON:0002165,1.01e-10,3;UBERON:0002062,1.01e-10,3;UBERON:0007280,1.01e-10,3;UBERON:0006947,5.00e-10,3;UBERON:0004054,5.00e-10,3;UBERON:0002081,1.20e-07,2;UBERON:0010227,1.20e-07,2;UBERON:0005904,1.30e-07,4;UBERON:0002133,1.41e-07,2;UBERON:0005090,1.50e-07,2;UBERON:0001630,1.50e-07,2;UBERON:0000948,1.71e-07,24;UBERON:0005498,1.71e-07,24;UBERON:0004140,1.71e-07,24;UBERON:0009881,1.71e-07,24;UBERON:0004141,1.71e-07,24;UBERON:0003084,1.71e-07,24;UBERON:0007005,1.71e-07,24;UBERON:0004139,1.71e-07,24;UBERON:0004291,1.71e-07,24;UBERON:0000160,3.99e-07,17;UBERON:0003135,5.16e-07,11;UBERON:0003127,7.56e-07,2;UBERON:0002360,8.78e-07,2;UBERON:0000094,8.78e-07,2;UBERON:0010743,8.78e-07,2 | |||
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| ||
|short_description=p3@PLN | |short_description=p3@PLN | ||
}} | }} |
Latest revision as of 02:39, 20 September 2015
Short description: | p3@PLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLN_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 46bp_to_ENST00000357525_5end |
EntrezGene: | PLN |
HGNC: | 9080 |
UniProt: | P26678 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.04e-40 | 114 |
compound organ | 1.55e-13 | 68 |
primary circulatory organ | 1.66e-12 | 27 |
cardiac chamber | 7.79e-11 | 3 |
valve | 1.01e-10 | 3 |
cardiac mesenchyme | 1.01e-10 | 3 |
cardial valve | 1.01e-10 | 3 |
tunica intima | 1.01e-10 | 3 |
heart layer | 1.01e-10 | 3 |
endocardium | 1.01e-10 | 3 |
endocardial cushion | 1.01e-10 | 3 |
presumptive endocardium | 1.01e-10 | 3 |
male genital duct | 5.00e-10 | 3 |
internal male genitalia | 5.00e-10 | 3 |
cardiac atrium | 1.20e-07 | 2 |
future cardiac atrium | 1.20e-07 | 2 |
duct of male reproductive system | 1.30e-07 | 4 |
atrioventricular valve | 1.41e-07 | 2 |
muscle structure | 1.50e-07 | 2 |
muscle organ | 1.50e-07 | 2 |
heart | 1.71e-07 | 24 |
primitive heart tube | 1.71e-07 | 24 |
primary heart field | 1.71e-07 | 24 |
anterior lateral plate mesoderm | 1.71e-07 | 24 |
heart tube | 1.71e-07 | 24 |
heart primordium | 1.71e-07 | 24 |
cardiac mesoderm | 1.71e-07 | 24 |
cardiogenic plate | 1.71e-07 | 24 |
heart rudiment | 1.71e-07 | 24 |
intestine | 3.99e-07 | 17 |
male reproductive organ | 5.16e-07 | 11 |
open tracheal system trachea | 7.56e-07 | 2 |
meninx | 8.78e-07 | 2 |
membrane organ | 8.78e-07 | 2 |
meningeal cluster | 8.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.50e-07 | 2 |