FFCP PHASE1:Hg19::chr10:96698406..96698421,+: Difference between revisions
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|id=chr10:96698406..96698421,+
|short_description=p1@CYP2C9
|description=CAGE_peak_1_at_CYP2C9_5end
|association_with_transcript=0bp_to_ENST00000461906,ENST00000545...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1559 | |EntrezGene=1559 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2623 | |HGNC=2623 | ||
|UniProt=F5H451, | |TSSclassifier=strong | ||
|UniProt=F5H451,P11712,Q5VX92,Q8WW80 | |||
|association_with_transcript=0bp_to_ENST00000461906,ENST00000545448,NM_000771,uc001kjz.2,uc001kka.3,uc009xut.2_5end | |||
|cluster_id=chr10:96698406..96698421,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CYP2C9_5end | |||
|id=chr10:96698406..96698421,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.91e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.98e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.98e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.64e-13!2;DOID:178!1.48e-07!1;DOID:326!1.48e-07!1;DOID:3978!1.48e-07!1;DOID:3394!1.48e-07!1;DOID:5844!1.48e-07!1;DOID:1287!3.49e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-10!115;UBERON:0009497!6.99e-09!25;UBERON:0000015!6.99e-09!25;UBERON:0002423!6.99e-09!25;UBERON:0006235!6.99e-09!25;UBERON:0004161!6.99e-09!25;UBERON:0002107!1.59e-08!19;UBERON:0006925!1.59e-08!19;UBERON:0008836!1.59e-08!19;UBERON:0003929!4.43e-08!54;UBERON:0001301!1.07e-07!1;UBERON:0000160!1.19e-07!27;UBERON:0002146!1.58e-07!1;UBERON:0005623!1.58e-07!1;UBERON:0007190!2.31e-07!1;UBERON:0008835!2.53e-07!22;UBERON:0003894!2.53e-07!22;UBERON:0002336!2.80e-07!1;UBERON:0001018!2.80e-07!1;UBERON:0002473!2.80e-07!1;UBERON:0005340!2.80e-07!1;UBERON:0002316!2.80e-07!1;UBERON:0003544!2.80e-07!1;UBERON:0001020!2.80e-07!1;UBERON:0005970!2.80e-07!1;UBERON:0002437!2.80e-07!1;UBERON:0001242!4.91e-07!4;UBERON:0001262!4.91e-07!4;UBERON:0004786!4.91e-07!4;UBERON:0004808!4.91e-07!4;UBERON:0001277!4.91e-07!4;UBERON:0009854!5.42e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.93e-20;4!UBERON:0002107;7.98e-15;19!UBERON:0006925;7.98e-15;19!UBERON:0001301;3.64e-12;1!UBERON:0002423;3.01e-11;25!UBERON:0000160;4.26e-10;17!UBERON:0002365;4.79e-09;31!UBERON:0002330;4.79e-09;31!UBERON:0005409;6.07e-08;22!UBERON:0002368;7.13e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.99e-20,4;UBERON:0002107,7.98e-15,19;UBERON:0006925,7.98e-15,19;UBERON:0008836,7.98e-15,19;UBERON:0008835,8.56e-13,22;UBERON:0003894,8.56e-13,22;UBERON:0009854,3.11e-12,23;UBERON:0001301,3.45e-12,1;UBERON:0007499,3.01e-11,25;UBERON:0009497,3.01e-11,25;UBERON:0000015,3.01e-11,25;UBERON:0002423,3.01e-11,25;UBERON:0006235,3.01e-11,25;UBERON:0004161,3.01e-11,25;UBERON:0009856,8.22e-11,26;UBERON:0000160,4.31e-10,17;UBERON:0002365,4.76e-09,31;UBERON:0002330,4.76e-09,31;UBERON:0002368,5.35e-08,35;UBERON:0005172,4.16e-07,54;UBERON:0005173,4.16e-07,54;UBERON:0005409,4.84e-07,25 | |||
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|short_description=p1@CYP2C9 | |||
}} | }} |
Latest revision as of 02:36, 20 September 2015
Short description: | p1@CYP2C9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2C9_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000461906, ENST00000545448, NM_000771, uc001kjz.2, uc001kka.3, uc009xut.2_5end |
EntrezGene: | CYP2C9 |
HGNC: | 2623 |
UniProt: | F5H451P11712Q5VX92Q8WW80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.98e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.99e-20 | 4 |
liver | 7.98e-15 | 19 |
digestive gland | 7.98e-15 | 19 |
liver bud | 7.98e-15 | 19 |
hepatic diverticulum | 8.56e-13 | 22 |
liver primordium | 8.56e-13 | 22 |
digestive tract diverticulum | 3.11e-12 | 23 |
epididymis | 3.45e-12 | 1 |
epithelial sac | 3.01e-11 | 25 |
epithelium of foregut-midgut junction | 3.01e-11 | 25 |
anatomical boundary | 3.01e-11 | 25 |
hepatobiliary system | 3.01e-11 | 25 |
foregut-midgut junction | 3.01e-11 | 25 |
septum transversum | 3.01e-11 | 25 |
sac | 8.22e-11 | 26 |
intestine | 4.31e-10 | 17 |
exocrine gland | 4.76e-09 | 31 |
exocrine system | 4.76e-09 | 31 |
endocrine gland | 5.35e-08 | 35 |
abdomen element | 4.16e-07 | 54 |
abdominal segment element | 4.16e-07 | 54 |
gastrointestinal system | 4.84e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.02e-07 | 2 |