FFCP PHASE1:Hg19::chr10:96443479..96443495,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1562 | |EntrezGene=1562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2620 | |HGNC=2620 | ||
|TSSclassifier=strong | |||
|UniProt=P33260 | |UniProt=P33260 | ||
|association_with_transcript=101bp_to_ENST00000285979_5end | |association_with_transcript=101bp_to_ENST00000285979_5end | ||
|cluster_id=chr10:96443479..96443495,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_CYP2C18_5end | |description=CAGE_peak_2_at_CYP2C18_5end | ||
|id=chr10:96443479..96443495,+ | |id=chr10:96443479..96443495,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.05e-07;2!CL:0001016;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.99e-07,2;CL:0001016,1.99e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.09e-14;1 | |||
|ontology_enrichment_disease=DOID:3151!6.02e-07!1;DOID:3149!6.02e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!5.81e-12!2;UBERON:0004921!3.99e-10!129;UBERON:0004185!3.99e-10!129;UBERON:0005409!3.98e-09!35;UBERON:0001007!6.11e-09!155;UBERON:0001555!6.11e-09!155;UBERON:0007026!6.11e-09!155;UBERON:0004119!6.62e-09!169;UBERON:0000925!6.62e-09!169;UBERON:0006595!6.62e-09!169;UBERON:0009497!1.16e-07!25;UBERON:0000015!1.16e-07!25;UBERON:0002423!1.16e-07!25;UBERON:0006235!1.16e-07!25;UBERON:0004161!1.16e-07!25;UBERON:0002107!2.99e-07!19;UBERON:0006925!2.99e-07!19;UBERON:0008836!2.99e-07!19;UBERON:0005057!3.39e-07!26;UBERON:0007029!3.78e-07!1;UBERON:0001041!5.39e-07!98;UBERON:0000160!7.47e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.99e-23;4!UBERON:0005409;1.80e-19;22!UBERON:0007029;1.51e-13;1!UBERON:0000160;1.74e-11;17!UBERON:0000945;3.63e-11;5!UBERON:0010039;3.63e-11;5!UBERON:0004921;7.61e-11;33!UBERON:0002423;3.76e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.22e-23,4;UBERON:0005409,3.51e-17,25;UBERON:0007029,1.10e-13,1;UBERON:0000160,1.81e-11,17;UBERON:0009497,3.99e-08,25;UBERON:0000015,3.99e-08,25;UBERON:0002423,3.99e-08,25;UBERON:0006235,3.99e-08,25;UBERON:0004161,3.99e-08,25;UBERON:0004921,1.81e-07,118;UBERON:0001007,2.47e-07,145;UBERON:0001555,2.47e-07,145;UBERON:0007026,2.47e-07,145;UBERON:0000945,2.61e-07,8;UBERON:0010039,2.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73705945469591,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39591143470369,0,0,0,0,0.067401132980677,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,3.20179492109029,0,8.35724419493815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,1.94284397223656,0,0,0,0,0,0,14.2000450918618,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84269110597214,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73705945469591,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39591143470369,0,0,0,0,0.067401132980677,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,3.20179492109029,0,8.35724419493815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,1.94284397223656,0,0,0,0,0,0,14.2000450918618,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84269110597214,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p2@CYP2C18 | |short_description=p2@CYP2C18 | ||
}} | }} |
Latest revision as of 02:31, 20 September 2015
Short description: | p2@CYP2C18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYP2C18_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 101bp_to_ENST00000285979_5end |
EntrezGene: | CYP2C18 |
HGNC: | 2620 |
UniProt: | P33260 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.99e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.22e-23 | 4 |
gastrointestinal system | 3.51e-17 | 25 |
surface | 1.10e-13 | 1 |
intestine | 1.81e-11 | 17 |
epithelium of foregut-midgut junction | 3.99e-08 | 25 |
anatomical boundary | 3.99e-08 | 25 |
hepatobiliary system | 3.99e-08 | 25 |
foregut-midgut junction | 3.99e-08 | 25 |
septum transversum | 3.99e-08 | 25 |
subdivision of digestive tract | 1.81e-07 | 118 |
digestive system | 2.47e-07 | 145 |
digestive tract | 2.47e-07 | 145 |
primitive gut | 2.47e-07 | 145 |
stomach | 2.61e-07 | 8 |
food storage organ | 2.61e-07 | 8 |