FFCP PHASE1:Hg19::chr10:96305516..96305531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3070 | |EntrezGene=3070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4861 | |HGNC=4861 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc001kjs.2_5end | |association_with_transcript=-11bp_to_uc001kjs.2_5end | ||
|cluster_id=chr10:96305516..96305531,+ | |||
|coexpression_cluster_id=C3061 | |coexpression_cluster_id=C3061 | ||
|description=CAGE_peak_2_at_HELLS_5end | |description=CAGE_peak_2_at_HELLS_5end | ||
Latest revision as of 02:18, 20 September 2015
| Short description: | p2@HELLS |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HELLS_5end |
| Coexpression cluster: | C3061_granulocyte_testicular_hepatoblastoma_HES3GFP_retinoblastoma_H9_Hodgkin |
| Association with transcript: | -11bp_to_uc001kjs.2_5end |
| EntrezGene: | HELLS |
| HGNC: | 4861 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@HELLS |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 7.77e-15 | 53 |
| common lymphoid progenitor | 7.77e-15 | 53 |
| lymphoid lineage restricted progenitor cell | 2.69e-14 | 52 |
| lymphocyte of B lineage | 7.87e-11 | 24 |
| pro-B cell | 7.87e-11 | 24 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 8.78e-34 | 235 |
| disease of cellular proliferation | 1.01e-32 | 239 |
| cell type cancer | 2.09e-24 | 143 |
| carcinoma | 3.23e-22 | 106 |
| organ system cancer | 2.44e-17 | 137 |
| hematologic cancer | 1.40e-10 | 51 |
| immune system cancer | 1.40e-10 | 51 |
| leukemia | 1.82e-07 | 39 |
Showing 1 to 8 of 8 entries
