FFCP PHASE1:Hg19::chr22:36692965..36693006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4627 | |EntrezGene=4627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7579 | |HGNC=7579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_ENST00000459960_5end | |association_with_transcript=362bp_to_ENST00000459960_5end | ||
|cluster_id=chr22:36692965..36693006,- | |||
|description=CAGE_peak_8_at_MYH9_5end | |description=CAGE_peak_8_at_MYH9_5end | ||
|id=chr22:36692965..36693006,- | |id=chr22:36692965..36693006,- | ||
|ontology_enrichment_celltype=CL:0000220!3.26e-09!246;CL:0000144!4.25e-09!625;CL:0002321!7.35e-09!248;CL:0000548!1.77e-07!679;CL:0000004!1.77e-07!679;CL:0000255!1.77e-07!679;CL:0000012!2.57e-07!682;CL:0002371!4.56e-07!591;CL:0000222!5.33e-07!119;CL:0000213!9.90e-07!57;CL:0000215!9.90e-07!57 | |ontology_enrichment_celltype=CL:0000220!3.26e-09!246;CL:0000144!4.25e-09!625;CL:0002321!7.35e-09!248;CL:0000548!1.77e-07!679;CL:0000004!1.77e-07!679;CL:0000255!1.77e-07!679;CL:0000012!2.57e-07!682;CL:0002371!4.56e-07!591;CL:0000222!5.33e-07!119;CL:0000213!9.90e-07!57;CL:0000215!9.90e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.28e-08;15!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | |ontology_enrichment_celltype_v019=CL:1000449;8.28e-08;15!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.12e-07,15;CL:0000213,2.08e-07,58;CL:0000215,2.08e-07,58;CL:0002681,3.73e-07,12;CL:0002584,3.73e-07,12;CL:0002321,7.47e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.56e-07!118;UBERON:0004876!3.32e-07!20;UBERON:0000353!9.84e-07!17 | |ontology_enrichment_uberon=UBERON:0003914!2.56e-07!118;UBERON:0004876!3.32e-07!20;UBERON:0000353!9.84e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.22e-09;15!UBERON:0006555;8.28e-08;15!UBERON:0004819;8.28e-08;15!UBERON:0001285;8.28e-08;15!UBERON:0007684;8.28e-08;15!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000353;4.22e-09;15!UBERON:0006555;8.28e-08;15!UBERON:0004819;8.28e-08;15!UBERON:0001285;8.28e-08;15!UBERON:0007684;8.28e-08;15!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.13e-08,15;UBERON:0004211,1.12e-07,15;UBERON:0009773,1.12e-07,15;UBERON:0001231,1.12e-07,15;UBERON:0001285,1.12e-07,15;UBERON:0007684,1.12e-07,15;UBERON:0004208,1.12e-07,15;UBERON:0003914,2.99e-07,117;UBERON:0001225,3.73e-07,12;UBERON:0008987,3.73e-07,12;UBERON:0006555,5.83e-07,16;UBERON:0004819,5.83e-07,16;UBERON:0004876,7.64e-07,11 | |||
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| ||
|short_description=p8@MYH9 | |short_description=p8@MYH9 | ||
}} | }} |
Latest revision as of 01:58, 20 September 2015
Short description: | p8@MYH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYH9_5end |
Coexpression cluster: | NA |
Association with transcript: | 362bp_to_ENST00000459960_5end |
EntrezGene: | MYH9 |
HGNC: | 7579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.12e-07 | 15 |
lining cell | 2.08e-07 | 58 |
barrier cell | 2.08e-07 | 58 |
kidney cortical cell | 3.73e-07 | 12 |
renal cortical epithelial cell | 3.73e-07 | 12 |
embryonic cell | 7.47e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.13e-08 | 15 |
nephron epithelium | 1.12e-07 | 15 |
renal tubule | 1.12e-07 | 15 |
nephron tubule | 1.12e-07 | 15 |
nephron | 1.12e-07 | 15 |
uriniferous tubule | 1.12e-07 | 15 |
nephrogenic mesenchyme | 1.12e-07 | 15 |
epithelial tube | 2.99e-07 | 117 |
cortex of kidney | 3.73e-07 | 12 |
renal parenchyma | 3.73e-07 | 12 |
excretory tube | 5.83e-07 | 16 |
kidney epithelium | 5.83e-07 | 16 |
urogenital ridge | 7.64e-07 | 11 |