FFCP PHASE1:Hg19::chr7:93551321..93551336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=305bp_to_NM_004126,uc003und.2_5end | |association_with_transcript=305bp_to_NM_004126,uc003und.2_5end | ||
|cluster_id=chr7:93551321..93551336,+ | |||
|coexpression_cluster_id=C2004 | |||
|description=CAGE_peak_6_at_GNG11_5end | |description=CAGE_peak_6_at_GNG11_5end | ||
|id=chr7:93551321..93551336,+ | |id=chr7:93551321..93551336,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.68e-24!180;CL:0000222!1.22e-22!119;CL:0000183!4.76e-17!59;CL:0000680!7.62e-17!57;CL:0000056!7.62e-17!57;CL:0000355!7.62e-17!57;CL:0000187!7.15e-16!54;CL:0000192!1.96e-15!42;CL:0000514!1.96e-15!42;CL:0002139!3.21e-14!24;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000359!1.42e-13!32;CL:0000115!1.47e-13!35;CL:0000057!1.13e-12!75;CL:0002078!3.17e-11!44;CL:0000071!3.30e-11!18;CL:0002546!3.30e-11!18;CL:0000213!2.15e-07!57;CL:0000215!2.15e-07!57;CL:0000220!4.48e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.68e-24!180;CL:0000222!1.22e-22!119;CL:0000183!4.76e-17!59;CL:0000680!7.62e-17!57;CL:0000056!7.62e-17!57;CL:0000355!7.62e-17!57;CL:0000187!7.15e-16!54;CL:0000192!1.96e-15!42;CL:0000514!1.96e-15!42;CL:0002139!3.21e-14!24;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000359!1.42e-13!32;CL:0000115!1.47e-13!35;CL:0000057!1.13e-12!75;CL:0002078!3.17e-11!44;CL:0000071!3.30e-11!18;CL:0002546!3.30e-11!18;CL:0000213!2.15e-07!57;CL:0000215!2.15e-07!57;CL:0000220!4.48e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.60e-15;24!CL:0000359;1.50e-13;32!CL:0000115;1.23e-12;36!CL:0000071;7.53e-12;18!CL:0000192;1.86e-11;43!CL:0000187;3.56e-09;55!CL:0002078;6.80e-08;45!CL:0002494;8.28e-07;16!CL:0000393;9.75e-07;61!CL:0000211;9.75e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.65e-23,121;CL:0000680,4.99e-17,58;CL:0000056,4.99e-17,58;CL:0000355,4.99e-17,58;CL:0000187,5.33e-16,55;CL:0000192,8.66e-16,43;CL:0000514,8.66e-16,43;CL:0002139,4.77e-15,24;CL:0000115,8.27e-15,36;CL:0000359,4.95e-14,32;CL:0000393,3.04e-13,61;CL:0000211,3.04e-13,61;CL:0000057,5.40e-13,76;CL:0002078,4.25e-12,45;CL:0000071,7.74e-12,18;CL:0002546,7.74e-12,18;CL:0000213,1.58e-07,58;CL:0000215,1.58e-07,58;CL:0002494,7.93e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;7.53e-12;18!CL:0000514;1.86e-11;43!CL:0000355;4.36e-09;58!CL:0000222;6.51e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!4.58e-07!14 | |ontology_enrichment_disease=DOID:2394!4.58e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.12e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.99e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!4.80e-36!110;UBERON:0001009!2.05e-35!113;UBERON:0002049!1.49e-28!79;UBERON:0007798!1.49e-28!79;UBERON:0000055!1.22e-25!69;UBERON:0004872!1.38e-23!84;UBERON:0001981!5.50e-23!60;UBERON:0007500!5.50e-23!60;UBERON:0004537!5.50e-23!60;UBERON:0006965!5.50e-23!60;UBERON:0003914!3.97e-22!118;UBERON:0000914!1.16e-19!83;UBERON:0002329!1.16e-19!83;UBERON:0003077!1.16e-19!83;UBERON:0003059!1.16e-19!83;UBERON:0007282!1.16e-19!83;UBERON:0009618!1.16e-19!83;UBERON:0007285!1.16e-19!83;UBERON:0004290!2.06e-19!70;UBERON:0000490!7.78e-18!138;UBERON:0001637!1.59e-17!42;UBERON:0003509!1.59e-17!42;UBERON:0004572!1.59e-17!42;UBERON:0005256!1.09e-16!143;UBERON:0001134!3.37e-16!61;UBERON:0002036!3.37e-16!61;UBERON:0003082!3.37e-16!61;UBERON:0000477!3.93e-16!286;UBERON:0002385!1.29e-15!63;UBERON:0001015!1.29e-15!63;UBERON:0000383!1.29e-15!63;UBERON:0004573!1.72e-13!33;UBERON:0004571!1.72e-13!33;UBERON:0000486!2.21e-13!82;UBERON:0000119!6.27e-12!312;UBERON:0002100!1.04e-11!216;UBERON:0003104!2.92e-11!238;UBERON:0009142!2.92e-11!238;UBERON:0000483!3.11e-11!309;UBERON:0001986!3.30e-11!18;UBERON:0004638!3.30e-11!18;UBERON:0004852!3.30e-11!18;UBERON:0000487!7.59e-11!22;UBERON:0000481!1.43e-10!347;UBERON:0004111!6.55e-10!241;UBERON:0000468!8.27e-10!659;UBERON:0000926!4.18e-09!448;UBERON:0004120!4.18e-09!448;UBERON:0006603!4.18e-09!448;UBERON:0006914!5.26e-09!25;UBERON:0000467!6.27e-09!625;UBERON:0000475!6.47e-09!365;UBERON:0000025!6.97e-09!194;UBERON:0000480!1.05e-08!626;UBERON:0000947!4.23e-08!21;UBERON:0010191!4.23e-08!21 | |ontology_enrichment_uberon=UBERON:0004535!4.80e-36!110;UBERON:0001009!2.05e-35!113;UBERON:0002049!1.49e-28!79;UBERON:0007798!1.49e-28!79;UBERON:0000055!1.22e-25!69;UBERON:0004872!1.38e-23!84;UBERON:0001981!5.50e-23!60;UBERON:0007500!5.50e-23!60;UBERON:0004537!5.50e-23!60;UBERON:0006965!5.50e-23!60;UBERON:0003914!3.97e-22!118;UBERON:0000914!1.16e-19!83;UBERON:0002329!1.16e-19!83;UBERON:0003077!1.16e-19!83;UBERON:0003059!1.16e-19!83;UBERON:0007282!1.16e-19!83;UBERON:0009618!1.16e-19!83;UBERON:0007285!1.16e-19!83;UBERON:0004290!2.06e-19!70;UBERON:0000490!7.78e-18!138;UBERON:0001637!1.59e-17!42;UBERON:0003509!1.59e-17!42;UBERON:0004572!1.59e-17!42;UBERON:0005256!1.09e-16!143;UBERON:0001134!3.37e-16!61;UBERON:0002036!3.37e-16!61;UBERON:0003082!3.37e-16!61;UBERON:0000477!3.93e-16!286;UBERON:0002385!1.29e-15!63;UBERON:0001015!1.29e-15!63;UBERON:0000383!1.29e-15!63;UBERON:0004573!1.72e-13!33;UBERON:0004571!1.72e-13!33;UBERON:0000486!2.21e-13!82;UBERON:0000119!6.27e-12!312;UBERON:0002100!1.04e-11!216;UBERON:0003104!2.92e-11!238;UBERON:0009142!2.92e-11!238;UBERON:0000483!3.11e-11!309;UBERON:0001986!3.30e-11!18;UBERON:0004638!3.30e-11!18;UBERON:0004852!3.30e-11!18;UBERON:0000487!7.59e-11!22;UBERON:0000481!1.43e-10!347;UBERON:0004111!6.55e-10!241;UBERON:0000468!8.27e-10!659;UBERON:0000926!4.18e-09!448;UBERON:0004120!4.18e-09!448;UBERON:0006603!4.18e-09!448;UBERON:0006914!5.26e-09!25;UBERON:0000467!6.27e-09!625;UBERON:0000475!6.47e-09!365;UBERON:0000025!6.97e-09!194;UBERON:0000480!1.05e-08!626;UBERON:0000947!4.23e-08!21;UBERON:0010191!4.23e-08!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.58e-13;42!UBERON:0003509;4.58e-13;42!UBERON:0004572;4.58e-13;42!UBERON:0004573;7.13e-13;33!UBERON:0004571;7.13e-13;33!UBERON:0000055;9.12e-13;65!UBERON:0007500;1.37e-12;56!UBERON:0001981;1.37e-12;56!UBERON:0004537;1.37e-12;56!UBERON:0002049;2.37e-12;75!UBERON:0007798;2.37e-12;75!UBERON:0003914;6.42e-12;74!UBERON:0004638;7.53e-12;18!UBERON:0001986;7.53e-12;18!UBERON:0004852;7.53e-12;18!UBERON:0000487;1.26e-11;22!UBERON:0004535;1.49e-10;109!UBERON:0001009;2.93e-10;112!UBERON:0006914;1.94e-09;25!UBERON:0000947;3.42e-08;21!UBERON:0010191;3.42e-08;21!UBERON:0000490;6.86e-07;33 | |||
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| ||
|short_description=p6@GNG11 | |short_description=p6@GNG11 | ||
}} | }} |
Latest revision as of 01:49, 20 September 2015
Short description: | p6@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GNG11_5end |
Coexpression cluster: | C2004_Endothelial_mesenchymal_Renal_Smooth_Hepatic_leiomyoma_Preadipocyte |
Association with transcript: | 305bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.65e-23 | 121 |
muscle precursor cell | 4.99e-17 | 58 |
myoblast | 4.99e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.99e-17 | 58 |
muscle cell | 5.33e-16 | 55 |
smooth muscle cell | 8.66e-16 | 43 |
smooth muscle myoblast | 8.66e-16 | 43 |
endothelial cell of vascular tree | 4.77e-15 | 24 |
endothelial cell | 8.27e-15 | 36 |
vascular associated smooth muscle cell | 4.95e-14 | 32 |
electrically responsive cell | 3.04e-13 | 61 |
electrically active cell | 3.04e-13 | 61 |
fibroblast | 5.40e-13 | 76 |
meso-epithelial cell | 4.25e-12 | 45 |
blood vessel endothelial cell | 7.74e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.74e-12 | 18 |
lining cell | 1.58e-07 | 58 |
barrier cell | 1.58e-07 | 58 |
cardiocyte | 7.93e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.99e-07 | 14 |