FFCP PHASE1:Hg19::chr7:93551194..93551205,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:93551194..93551205,+
|short_description=p9@GNG11
|description=CAGE_peak_9_at_GNG11_5end
|association_with_transcript=178bp_to_NM_004126,uc003und.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=178bp_to_NM_004126,uc003und.2_5end | |||
|cluster_id=chr7:93551194..93551205,+ | |||
|coexpression_cluster_id=C2907 | |||
|description=CAGE_peak_9_at_GNG11_5end | |||
|id=chr7:93551194..93551205,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.98e-24!119;CL:0000055!7.03e-24!180;CL:0000680!4.58e-21!57;CL:0000056!4.58e-21!57;CL:0000355!4.58e-21!57;CL:0000183!2.59e-20!59;CL:0000187!6.49e-20!54;CL:0000393!2.98e-19!60;CL:0000211!2.98e-19!60;CL:0000192!3.14e-19!42;CL:0000514!3.14e-19!42;CL:0000359!5.23e-17!32;CL:0002139!6.45e-16!24;CL:0000071!1.21e-12!18;CL:0002546!1.21e-12!18;CL:0000115!1.38e-12!35;CL:0002078!3.06e-10!44;CL:0000220!9.43e-09!246;CL:0002321!2.41e-08!248;CL:0000057!2.76e-08!75;CL:1000413!4.10e-07!9;CL:0000213!5.89e-07!57;CL:0000215!5.89e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-21;24!CL:0000359;5.35e-20;32!CL:0000071;4.59e-17;18!CL:0000115;1.84e-15;36!CL:0000192;6.71e-15;43!CL:0002078;4.16e-10;45!CL:0000187;5.14e-10;55!CL:1000413;2.32e-09;9!CL:0000393;5.22e-09;61!CL:0000211;5.22e-09;61!CL:0002539;2.25e-08;10!CL:0002544;2.54e-07;6!CL:0002494;5.14e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.18e-28,121;CL:0002139,1.25e-21,24;CL:0000192,9.16e-21,43;CL:0000514,9.16e-21,43;CL:0000359,1.13e-20,32;CL:0000680,1.24e-20,58;CL:0000056,1.24e-20,58;CL:0000355,1.24e-20,58;CL:0000187,4.18e-19,55;CL:0000115,3.47e-18,36;CL:0000393,1.39e-17,61;CL:0000211,1.39e-17,61;CL:0000071,4.76e-17,18;CL:0002546,4.76e-17,18;CL:0002078,6.57e-15,45;CL:0002321,2.93e-11,250;CL:0000213,6.61e-10,58;CL:0000215,6.61e-10,58;CL:1000413,2.51e-09,9;CL:0002539,1.79e-08,10;CL:0002544,2.58e-07,6;CL:0002494,6.76e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;4.59e-17;18!CL:0000514;6.71e-15;43!CL:0000355;9.88e-11;58!CL:0000222;1.45e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.87e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.41e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.23e-35!79;UBERON:0007798!1.23e-35!79;UBERON:0004535!6.67e-33!110;UBERON:0001009!4.01e-32!113;UBERON:0000055!6.08e-30!69;UBERON:0001981!1.62e-27!60;UBERON:0007500!1.62e-27!60;UBERON:0004537!1.62e-27!60;UBERON:0006965!1.62e-27!60;UBERON:0004872!1.30e-26!84;UBERON:0000477!3.07e-24!286;UBERON:0000914!1.05e-23!83;UBERON:0002329!1.05e-23!83;UBERON:0003077!1.05e-23!83;UBERON:0003059!1.05e-23!83;UBERON:0007282!1.05e-23!83;UBERON:0009618!1.05e-23!83;UBERON:0007285!1.05e-23!83;UBERON:0004290!3.29e-23!70;UBERON:0001637!4.02e-22!42;UBERON:0003509!4.02e-22!42;UBERON:0004572!4.02e-22!42;UBERON:0000119!2.11e-21!312;UBERON:0001134!2.27e-20!61;UBERON:0002036!2.27e-20!61;UBERON:0003082!2.27e-20!61;UBERON:0002385!2.90e-20!63;UBERON:0001015!2.90e-20!63;UBERON:0000383!2.90e-20!63;UBERON:0003914!3.70e-20!118;UBERON:0000483!4.61e-20!309;UBERON:0000490!2.31e-18!138;UBERON:0000025!9.74e-18!194;UBERON:0004111!1.98e-17!241;UBERON:0004573!2.41e-17!33;UBERON:0004571!2.41e-17!33;UBERON:0000486!1.73e-16!82;UBERON:0005256!1.49e-15!143;UBERON:0000475!2.71e-14!365;UBERON:0000467!3.57e-14!625;UBERON:0000480!5.89e-14!626;UBERON:0000481!6.38e-14!347;UBERON:0000468!2.19e-13!659;UBERON:0001986!1.21e-12!18;UBERON:0004638!1.21e-12!18;UBERON:0004852!1.21e-12!18;UBERON:0000487!1.38e-12!22;UBERON:0002100!7.79e-12!216;UBERON:0000947!6.53e-11!21;UBERON:0010191!6.53e-11!21;UBERON:0006914!7.31e-11!25;UBERON:0002050!8.12e-10!605;UBERON:0005423!8.12e-10!605;UBERON:0000923!9.24e-10!604;UBERON:0005291!9.24e-10!604;UBERON:0006598!9.24e-10!604;UBERON:0002532!9.24e-10!604;UBERON:0000922!2.11e-09!612;UBERON:0003104!8.12e-09!238;UBERON:0009142!8.12e-09!238;UBERON:0001135!3.97e-07!15;UBERON:0003915!4.10e-07!9;UBERON:0004700!4.10e-07!9;UBERON:0001917!4.10e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.63e-19;42!UBERON:0003509;1.63e-19;42!UBERON:0004572;1.63e-19;42!UBERON:0004573;2.84e-19;33!UBERON:0004571;2.84e-19;33!UBERON:0002049;4.57e-18;75!UBERON:0007798;4.57e-18;75!UBERON:0007500;7.95e-18;56!UBERON:0001981;7.95e-18;56!UBERON:0004537;7.95e-18;56!UBERON:0000055;4.11e-17;65!UBERON:0004638;4.59e-17;18!UBERON:0001986;4.59e-17;18!UBERON:0004852;4.59e-17;18!UBERON:0000487;3.15e-16;22!UBERON:0006914;1.22e-14;25!UBERON:0000947;1.11e-12;21!UBERON:0010191;1.11e-12;21!UBERON:0003914;3.65e-12;74!UBERON:0000490;4.63e-11;33!UBERON:0004535;5.13e-11;109!UBERON:0001009;4.73e-10;112!UBERON:0003915;2.32e-09;9!UBERON:0004700;2.32e-09;9!UBERON:0001917;2.32e-09;9!UBERON:0001135;6.23e-09;15!UBERON:0004237;2.25e-08;10!UBERON:0004695;2.25e-08;10!UBERON:0002111;2.25e-08;10!UBERON:0004178;2.25e-08;10 | |||
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| ||
|short_description=p9@GNG11 | |||
}} | }} |
Latest revision as of 01:48, 20 September 2015
Short description: | p9@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GNG11_5end |
Coexpression cluster: | C2907_mesenchymal_myxofibrosarcoma_serous_Smooth_Endothelial_leiomyoma_Fibroblast |
Association with transcript: | 178bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.18e-28 | 121 |
endothelial cell of vascular tree | 1.25e-21 | 24 |
smooth muscle cell | 9.16e-21 | 43 |
smooth muscle myoblast | 9.16e-21 | 43 |
vascular associated smooth muscle cell | 1.13e-20 | 32 |
muscle precursor cell | 1.24e-20 | 58 |
myoblast | 1.24e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-20 | 58 |
muscle cell | 4.18e-19 | 55 |
endothelial cell | 3.47e-18 | 36 |
electrically responsive cell | 1.39e-17 | 61 |
electrically active cell | 1.39e-17 | 61 |
blood vessel endothelial cell | 4.76e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.76e-17 | 18 |
meso-epithelial cell | 6.57e-15 | 45 |
embryonic cell | 2.93e-11 | 250 |
lining cell | 6.61e-10 | 58 |
barrier cell | 6.61e-10 | 58 |
endothelial cell of artery | 2.51e-09 | 9 |
aortic smooth muscle cell | 1.79e-08 | 10 |
aortic endothelial cell | 2.58e-07 | 6 |
cardiocyte | 6.76e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.41e-07 | 14 |