FFCP PHASE1:Hg19::chr7:93551154..93551186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=138bp_to_NM_004126,uc003und.2_5end | |association_with_transcript=138bp_to_NM_004126,uc003und.2_5end | ||
|cluster_id=chr7:93551154..93551186,+ | |||
|coexpression_cluster_id=C2907 | |coexpression_cluster_id=C2907 | ||
|description=CAGE_peak_4_at_GNG11_5end | |description=CAGE_peak_4_at_GNG11_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.34e-31!180;CL:0000222!4.27e-25!119;CL:0000680!7.54e-21!57;CL:0000056!7.54e-21!57;CL:0000355!7.54e-21!57;CL:0000183!8.42e-21!59;CL:0000187!8.65e-20!54;CL:0000192!2.39e-18!42;CL:0000514!2.39e-18!42;CL:0000393!2.61e-17!60;CL:0000211!2.61e-17!60;CL:0000359!1.47e-16!32;CL:0002139!1.71e-14!24;CL:0000057!5.02e-14!75;CL:0000115!9.27e-13!35;CL:0000071!2.39e-11!18;CL:0002546!2.39e-11!18;CL:0002078!2.21e-10!44;CL:0000220!2.89e-09!246;CL:0002321!9.68e-09!248;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0002494!4.59e-07!16 | |ontology_enrichment_celltype=CL:0000055!4.34e-31!180;CL:0000222!4.27e-25!119;CL:0000680!7.54e-21!57;CL:0000056!7.54e-21!57;CL:0000355!7.54e-21!57;CL:0000183!8.42e-21!59;CL:0000187!8.65e-20!54;CL:0000192!2.39e-18!42;CL:0000514!2.39e-18!42;CL:0000393!2.61e-17!60;CL:0000211!2.61e-17!60;CL:0000359!1.47e-16!32;CL:0002139!1.71e-14!24;CL:0000057!5.02e-14!75;CL:0000115!9.27e-13!35;CL:0000071!2.39e-11!18;CL:0002546!2.39e-11!18;CL:0002078!2.21e-10!44;CL:0000220!2.89e-09!246;CL:0002321!9.68e-09!248;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0002494!4.59e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.65e-16;32!CL:0002139;5.54e-15;24!CL:0000192;1.61e-13;43!CL:0000115;6.34e-12;36!CL:0000071;1.01e-11;18!CL:0000187;2.93e-11;55!CL:0000393;1.28e-08;61!CL:0000211;1.28e-08;61!CL:0002494;2.71e-07;16!CL:0002078;2.92e-07;45!CL:0000057;7.26e-07;73 | |ontology_enrichment_celltype_v019=CL:0000359;1.65e-16;32!CL:0002139;5.54e-15;24!CL:0000192;1.61e-13;43!CL:0000115;6.34e-12;36!CL:0000071;1.01e-11;18!CL:0000187;2.93e-11;55!CL:0000393;1.28e-08;61!CL:0000211;1.28e-08;61!CL:0002494;2.71e-07;16!CL:0002078;2.92e-07;45!CL:0000057;7.26e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.66e-25,121;CL:0000680,2.98e-21,58;CL:0000056,2.98e-21,58;CL:0000355,2.98e-21,58;CL:0000187,3.76e-20,55;CL:0000192,1.36e-18,43;CL:0000514,1.36e-18,43;CL:0000359,3.95e-17,32;CL:0000393,1.01e-16,61;CL:0000211,1.01e-16,61;CL:0002139,5.54e-15,24;CL:0000057,6.39e-15,76;CL:0000115,4.80e-14,36;CL:0000071,1.02e-11,18;CL:0002546,1.02e-11,18;CL:0002078,4.10e-11,45;CL:0000213,7.11e-08,58;CL:0000215,7.11e-08,58;CL:0002494,2.83e-07,16;CL:0002321,5.80e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.61e-13;43!CL:0002546;1.01e-11;18!CL:0000355;3.91e-11;58!CL:0000222;2.08e-07;121 | |ontology_enrichment_development_v019=CL:0000514;1.61e-13;43!CL:0002546;1.01e-11;18!CL:0000355;3.91e-11;58!CL:0000222;2.08e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.33e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;6.33e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.57e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!3.47e-37!110;UBERON:0001009!5.90e-37!113;UBERON:0002049!2.64e-35!79;UBERON:0007798!2.64e-35!79;UBERON:0000055!4.80e-30!69;UBERON:0004872!1.38e-28!84;UBERON:0001981!3.09e-27!60;UBERON:0007500!3.09e-27!60;UBERON:0004537!3.09e-27!60;UBERON:0006965!3.09e-27!60;UBERON:0000477!9.27e-27!286;UBERON:0003914!2.06e-23!118;UBERON:0004290!1.77e-22!70;UBERON:0000914!5.57e-22!83;UBERON:0002329!5.57e-22!83;UBERON:0003077!5.57e-22!83;UBERON:0003059!5.57e-22!83;UBERON:0007282!5.57e-22!83;UBERON:0009618!5.57e-22!83;UBERON:0007285!5.57e-22!83;UBERON:0000119!8.79e-22!312;UBERON:0001637!1.33e-21!42;UBERON:0003509!1.33e-21!42;UBERON:0004572!1.33e-21!42;UBERON:0000483!1.71e-20!309;UBERON:0001134!1.48e-19!61;UBERON:0002036!1.48e-19!61;UBERON:0003082!1.48e-19!61;UBERON:0004111!1.56e-19!241;UBERON:0002385!2.89e-19!63;UBERON:0001015!2.89e-19!63;UBERON:0000383!2.89e-19!63;UBERON:0000025!5.35e-18!194;UBERON:0000490!6.84e-18!138;UBERON:0005256!4.46e-17!143;UBERON:0000486!7.10e-17!82;UBERON:0004573!8.96e-17!33;UBERON:0004571!8.96e-17!33;UBERON:0000475!1.01e-16!365;UBERON:0000481!2.47e-16!347;UBERON:0000468!2.84e-16!659;UBERON:0000467!2.33e-15!625;UBERON:0000480!4.59e-15!626;UBERON:0002100!7.38e-12!216;UBERON:0001986!2.39e-11!18;UBERON:0004638!2.39e-11!18;UBERON:0004852!2.39e-11!18;UBERON:0000487!3.73e-11!22;UBERON:0006914!2.48e-10!25;UBERON:0002050!2.59e-10!605;UBERON:0005423!2.59e-10!605;UBERON:0000923!2.70e-10!604;UBERON:0005291!2.70e-10!604;UBERON:0006598!2.70e-10!604;UBERON:0002532!2.70e-10!604;UBERON:0003104!3.43e-10!238;UBERON:0009142!3.43e-10!238;UBERON:0000947!4.03e-10!21;UBERON:0010191!4.03e-10!21;UBERON:0000922!8.49e-10!612;UBERON:0000948!3.52e-08!24;UBERON:0005498!3.52e-08!24;UBERON:0004140!3.52e-08!24;UBERON:0009881!3.52e-08!24;UBERON:0004141!3.52e-08!24;UBERON:0003084!3.52e-08!24;UBERON:0007005!3.52e-08!24;UBERON:0004139!3.52e-08!24;UBERON:0004291!3.52e-08!24;UBERON:0007100!6.05e-08!27;UBERON:0000926!4.69e-07!448;UBERON:0004120!4.69e-07!448;UBERON:0006603!4.69e-07!448 | |ontology_enrichment_uberon=UBERON:0004535!3.47e-37!110;UBERON:0001009!5.90e-37!113;UBERON:0002049!2.64e-35!79;UBERON:0007798!2.64e-35!79;UBERON:0000055!4.80e-30!69;UBERON:0004872!1.38e-28!84;UBERON:0001981!3.09e-27!60;UBERON:0007500!3.09e-27!60;UBERON:0004537!3.09e-27!60;UBERON:0006965!3.09e-27!60;UBERON:0000477!9.27e-27!286;UBERON:0003914!2.06e-23!118;UBERON:0004290!1.77e-22!70;UBERON:0000914!5.57e-22!83;UBERON:0002329!5.57e-22!83;UBERON:0003077!5.57e-22!83;UBERON:0003059!5.57e-22!83;UBERON:0007282!5.57e-22!83;UBERON:0009618!5.57e-22!83;UBERON:0007285!5.57e-22!83;UBERON:0000119!8.79e-22!312;UBERON:0001637!1.33e-21!42;UBERON:0003509!1.33e-21!42;UBERON:0004572!1.33e-21!42;UBERON:0000483!1.71e-20!309;UBERON:0001134!1.48e-19!61;UBERON:0002036!1.48e-19!61;UBERON:0003082!1.48e-19!61;UBERON:0004111!1.56e-19!241;UBERON:0002385!2.89e-19!63;UBERON:0001015!2.89e-19!63;UBERON:0000383!2.89e-19!63;UBERON:0000025!5.35e-18!194;UBERON:0000490!6.84e-18!138;UBERON:0005256!4.46e-17!143;UBERON:0000486!7.10e-17!82;UBERON:0004573!8.96e-17!33;UBERON:0004571!8.96e-17!33;UBERON:0000475!1.01e-16!365;UBERON:0000481!2.47e-16!347;UBERON:0000468!2.84e-16!659;UBERON:0000467!2.33e-15!625;UBERON:0000480!4.59e-15!626;UBERON:0002100!7.38e-12!216;UBERON:0001986!2.39e-11!18;UBERON:0004638!2.39e-11!18;UBERON:0004852!2.39e-11!18;UBERON:0000487!3.73e-11!22;UBERON:0006914!2.48e-10!25;UBERON:0002050!2.59e-10!605;UBERON:0005423!2.59e-10!605;UBERON:0000923!2.70e-10!604;UBERON:0005291!2.70e-10!604;UBERON:0006598!2.70e-10!604;UBERON:0002532!2.70e-10!604;UBERON:0003104!3.43e-10!238;UBERON:0009142!3.43e-10!238;UBERON:0000947!4.03e-10!21;UBERON:0010191!4.03e-10!21;UBERON:0000922!8.49e-10!612;UBERON:0000948!3.52e-08!24;UBERON:0005498!3.52e-08!24;UBERON:0004140!3.52e-08!24;UBERON:0009881!3.52e-08!24;UBERON:0004141!3.52e-08!24;UBERON:0003084!3.52e-08!24;UBERON:0007005!3.52e-08!24;UBERON:0004139!3.52e-08!24;UBERON:0004291!3.52e-08!24;UBERON:0007100!6.05e-08!27;UBERON:0000926!4.69e-07!448;UBERON:0004120!4.69e-07!448;UBERON:0006603!4.69e-07!448 | ||
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| ||
|short_description=p4@GNG11 | |short_description=p4@GNG11 | ||
}} | }} |
Latest revision as of 01:47, 20 September 2015
Short description: | p4@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNG11_5end |
Coexpression cluster: | C2907_mesenchymal_myxofibrosarcoma_serous_Smooth_Endothelial_leiomyoma_Fibroblast |
Association with transcript: | 138bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.66e-25 | 121 |
muscle precursor cell | 2.98e-21 | 58 |
myoblast | 2.98e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-21 | 58 |
muscle cell | 3.76e-20 | 55 |
smooth muscle cell | 1.36e-18 | 43 |
smooth muscle myoblast | 1.36e-18 | 43 |
vascular associated smooth muscle cell | 3.95e-17 | 32 |
electrically responsive cell | 1.01e-16 | 61 |
electrically active cell | 1.01e-16 | 61 |
endothelial cell of vascular tree | 5.54e-15 | 24 |
fibroblast | 6.39e-15 | 76 |
endothelial cell | 4.80e-14 | 36 |
blood vessel endothelial cell | 1.02e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-11 | 18 |
meso-epithelial cell | 4.10e-11 | 45 |
lining cell | 7.11e-08 | 58 |
barrier cell | 7.11e-08 | 58 |
cardiocyte | 2.83e-07 | 16 |
embryonic cell | 5.80e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.57e-07 | 14 |