FFCP PHASE1:Hg19::chr10:95360511..95360523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5950 | |EntrezGene=5950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |HGNC=9922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000471333_5end | |association_with_transcript=-25bp_to_ENST00000471333_5end | ||
|cluster_id=chr10:95360511..95360523,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_RBP4_5end | |description=CAGE_peak_9_at_RBP4_5end | ||
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|ontology_enrichment_celltype=CL:0000181!2.58e-16!12;CL:0000417!2.58e-16!12;CL:0000668!2.58e-16!12;CL:0000414!2.58e-16!12;CL:0000412!2.58e-16!12;CL:0000182!2.58e-16!12;CL:0000136!6.31e-13!15;CL:0002521!1.46e-08!3;CL:0000214!2.20e-08!3 | |ontology_enrichment_celltype=CL:0000181!2.58e-16!12;CL:0000417!2.58e-16!12;CL:0000668!2.58e-16!12;CL:0000414!2.58e-16!12;CL:0000412!2.58e-16!12;CL:0000182!2.58e-16!12;CL:0000136!6.31e-13!15;CL:0002521!1.46e-08!3;CL:0000214!2.20e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.01e-24;3!CL:0000136;3.26e-22;13!CL:0000182;2.35e-14;12 | |ontology_enrichment_celltype_v019=CL:0002521;1.01e-24;3!CL:0000136;3.26e-22;13!CL:0000182;2.35e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.29e-24,3;CL:0000136,2.71e-19,15;CL:0000182,2.20e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.44e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;1.44e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002190;1.01e-24;3!UBERON:0002107;4.86e-24;19!UBERON:0006925;4.86e-24;19!UBERON:0002423;2.56e-18;25!UBERON:0002072;2.90e-15;5!UBERON:0002365;8.98e-15;31!UBERON:0002330;8.98e-15;31!UBERON:0002368;8.53e-13;33!UBERON:0000949;2.33e-09;43!UBERON:0005172;7.93e-07;52!UBERON:0005173;7.93e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002190;1.01e-24;3!UBERON:0002107;4.86e-24;19!UBERON:0006925;4.86e-24;19!UBERON:0002423;2.56e-18;25!UBERON:0002072;2.90e-15;5!UBERON:0002365;8.98e-15;31!UBERON:0002330;8.98e-15;31!UBERON:0002368;8.53e-13;33!UBERON:0000949;2.33e-09;43!UBERON:0005172;7.93e-07;52!UBERON:0005173;7.93e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.29e-24,3;UBERON:0002107,4.64e-24,19;UBERON:0006925,4.64e-24,19;UBERON:0008836,4.64e-24,19;UBERON:0008835,8.28e-21,22;UBERON:0003894,8.28e-21,22;UBERON:0009854,6.52e-20,23;UBERON:0007499,2.47e-18,25;UBERON:0009497,2.47e-18,25;UBERON:0000015,2.47e-18,25;UBERON:0002423,2.47e-18,25;UBERON:0006235,2.47e-18,25;UBERON:0004161,2.47e-18,25;UBERON:0009856,1.23e-17,26;UBERON:0002072,3.35e-15,5;UBERON:0002365,8.16e-15,31;UBERON:0002330,8.16e-15,31;UBERON:0002368,3.91e-13,35;UBERON:0000949,3.11e-10,45;UBERON:0003929,1.56e-08,54;UBERON:0005172,1.56e-08,54;UBERON:0005173,1.56e-08,54;UBERON:0002530,8.22e-08,59;UBERON:0002417,1.11e-07,60;UBERON:0000916,1.11e-07,60 | |||
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|short_description=p9@RBP4 | |short_description=p9@RBP4 | ||
}} | }} |
Latest revision as of 01:44, 20 September 2015
Short description: | p9@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -25bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.29e-24 | 3 |
fat cell | 2.71e-19 | 15 |
hepatocyte | 2.20e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.29e-24 | 3 |
liver | 4.64e-24 | 19 |
digestive gland | 4.64e-24 | 19 |
liver bud | 4.64e-24 | 19 |
hepatic diverticulum | 8.28e-21 | 22 |
liver primordium | 8.28e-21 | 22 |
digestive tract diverticulum | 6.52e-20 | 23 |
epithelial sac | 2.47e-18 | 25 |
epithelium of foregut-midgut junction | 2.47e-18 | 25 |
anatomical boundary | 2.47e-18 | 25 |
hepatobiliary system | 2.47e-18 | 25 |
foregut-midgut junction | 2.47e-18 | 25 |
septum transversum | 2.47e-18 | 25 |
sac | 1.23e-17 | 26 |
hypodermis | 3.35e-15 | 5 |
exocrine gland | 8.16e-15 | 31 |
exocrine system | 8.16e-15 | 31 |
endocrine gland | 3.91e-13 | 35 |
endocrine system | 3.11e-10 | 45 |
gut epithelium | 1.56e-08 | 54 |
abdomen element | 1.56e-08 | 54 |
abdominal segment element | 1.56e-08 | 54 |
gland | 8.22e-08 | 59 |
abdominal segment of trunk | 1.11e-07 | 60 |
abdomen | 1.11e-07 | 60 |