FFCP PHASE1:Hg19::chr2:216003367..216003380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26154 | |EntrezGene=26154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14637 | |HGNC=14637 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UK0 | |UniProt=Q86UK0 | ||
|association_with_transcript=-216bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | |association_with_transcript=-216bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | ||
|cluster_id=chr2:216003367..216003380,- | |||
|coexpression_cluster_id=C4181 | |||
|description=CAGE_peak_3_at_ABCA12_5end | |description=CAGE_peak_3_at_ABCA12_5end | ||
|id=chr2:216003367..216003380,- | |id=chr2:216003367..216003380,- | ||
|ontology_enrichment_celltype=CL:0002076!9.35e-17!43;CL:0000066!2.37e-16!254;CL:0000223!3.27e-12!59;CL:0002251!2.63e-09!21;CL:0002621!5.41e-08!3;CL:0002231!1.17e-07!3;CL:0002327!8.55e-07!4 | |ontology_enrichment_celltype=CL:0002076!9.35e-17!43;CL:0000066!2.37e-16!254;CL:0000223!3.27e-12!59;CL:0002251!2.63e-09!21;CL:0002621!5.41e-08!3;CL:0002231!1.17e-07!3;CL:0002327!8.55e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.30e-13;4!CL:0002076;1.36e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.04e-13,4;CL:0000066,1.22e-09,253;CL:0002076,1.02e-08,42;CL:0000223,2.14e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.08e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!5.52e-12!14;DOID:305!8.65e-11!106;DOID:5093!8.89e-11!4;DOID:1612!8.89e-11!4;DOID:0050687!1.58e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.97e-13;4!DOID:1612;5.97e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.43e-13,4;DOID:1612,4.43e-13,4;DOID:305,5.24e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.99e-08!35;UBERON:0001949!5.41e-08!3;UBERON:0005631!3.12e-07!14;UBERON:0000158!3.12e-07!14;UBERON:0001911!8.55e-07!4;UBERON:0005333!8.55e-07!4;UBERON:0008425!8.55e-07!4;UBERON:0005311!8.55e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.30e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.04e-13,4;UBERON:0005333,2.04e-13,4;UBERON:0008425,2.04e-13,4;UBERON:0005311,2.04e-13,4;UBERON:0000076,6.48e-07,8 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.903106483949403,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.09750285408626,1.1240175325762,0.603173834469785,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,5.0152772713595,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,2.3941057123333,0,0,0,0,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,3.8015530533025,1.34533047155574,1.14851441245126,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.14870036263921,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,5.72867758961949,0,0,0,0,0,0,0,2.3438498497671,18.2791399992049,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,4.6112780877612,0,0,0,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9138648495179,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0.138674673013139,0,0.0979923974143777,0.0870592065804026,1.57254001417827,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0.586654148204409,0,0,0,0.288180834308212,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.342173675768659,1.40963004463334,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67855409263333,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92590874004102,1.29766695682514,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,1.40538670403555,0,0,0,1.36597314810779,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,2.79835236589801,2.67830907908486,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,1.00411087549747,0,1.22104902916462,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p3@ABCA12 | |short_description=p3@ABCA12 | ||
}} | }} |
Latest revision as of 01:37, 20 September 2015
Short description: | p3@ABCA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCA12_5end |
Coexpression cluster: | C4181_breast_ductal_bile_Mammary_Prostate_oral_malignant |
Association with transcript: | -216bp_to_ENST00000272895, NM_173076, uc002vew.2, uc010zjn.1_5end |
EntrezGene: | ABCA12 |
HGNC: | 14637 |
UniProt: | Q86UK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.04e-13 | 4 |
epithelial cell | 1.22e-09 | 253 |
endo-epithelial cell | 1.02e-08 | 42 |
endodermal cell | 2.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.04e-13 | 4 |
mammary bud | 2.04e-13 | 4 |
mammary ridge | 2.04e-13 | 4 |
mammary placode | 2.04e-13 | 4 |
external ectoderm | 6.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.43e-13 | 4 |
breast cancer | 4.43e-13 | 4 |
carcinoma | 5.24e-07 | 106 |