FFCP PHASE1:Hg19::chr18:57364940..57364971,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:57364940..57364971,- to FFCP PHASE1:Hg19::chr18:57364940..57364971,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147372 | |EntrezGene=147372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29426 | |HGNC=29426 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXH8 | |UniProt=Q6UXH8 | ||
|association_with_transcript=-296bp_to_NM_133459,uc002lib.2_5end | |||
|cluster_id=chr18:57364940..57364971,- | |||
|coexpression_cluster_id=C3733 | |||
|description=CAGE_peak_3_at_CCBE1_5end | |||
|id=chr18:57364940..57364971,- | |||
|ontology_enrichment_celltype=CL:0000055!2.09e-31!180;CL:0000057!2.85e-25!75;CL:0002620!1.68e-14!23;CL:0000680!2.65e-10!57;CL:0000056!2.65e-10!57;CL:0000355!2.65e-10!57;CL:0000222!1.34e-09!119;CL:0000183!6.57e-09!59;CL:0000187!9.34e-09!54;CL:0000393!1.13e-08!60;CL:0000211!1.13e-08!60;CL:0002321!1.48e-07!248;CL:0000192!1.77e-07!42;CL:0000514!1.77e-07!42;CL:0000220!2.06e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.66e-19;23!CL:0000057;1.08e-11;73!CL:0002556;2.27e-08;6!CL:0000680;1.87e-07;7!CL:0002559;3.72e-07;5!CL:0002551;4.87e-07;6!CL:0002552;9.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.19e-27,76;CL:0002620,1.63e-19,23;CL:0000680,2.83e-10,58;CL:0000056,2.83e-10,58;CL:0000355,2.83e-10,58;CL:0000187,2.10e-08,55;CL:0002556,2.25e-08,6;CL:0000393,2.35e-07,61;CL:0000211,2.35e-07,61;CL:0002559,3.69e-07,5;CL:0000048,4.27e-07,427;CL:0002551,4.42e-07,6;CL:0000222,4.94e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.75e-18!83;UBERON:0002329!6.75e-18!83;UBERON:0003077!6.75e-18!83;UBERON:0003059!6.75e-18!83;UBERON:0007282!6.75e-18!83;UBERON:0009618!6.75e-18!83;UBERON:0007285!6.75e-18!83;UBERON:0005256!1.32e-14!143;UBERON:0004290!8.26e-14!70;UBERON:0002100!1.08e-13!216;UBERON:0000486!5.96e-13!82;UBERON:0003102!7.24e-12!95;UBERON:0002097!2.89e-11!40;UBERON:0000475!5.01e-11!365;UBERON:0002199!1.47e-10!45;UBERON:0002416!1.47e-10!45;UBERON:0001134!4.32e-09!61;UBERON:0002036!4.32e-09!61;UBERON:0003082!4.32e-09!61;UBERON:0003104!1.22e-08!238;UBERON:0009142!1.22e-08!238;UBERON:0002385!2.34e-08!63;UBERON:0001015!2.34e-08!63;UBERON:0000383!2.34e-08!63;UBERON:0002067!5.63e-08!9;UBERON:0004016!5.63e-08!9;UBERON:0010083!5.63e-08!9;UBERON:0000481!9.37e-08!347;UBERON:0000490!2.27e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.17e-11;41!UBERON:0002067;2.05e-10;9!UBERON:0002199;7.43e-09;46!UBERON:0002416;7.43e-09;46!UBERON:0003102;1.25e-08;50!UBERON:0001758;2.27e-08;6!UBERON:0003672;2.27e-08;6!UBERON:0002384;9.34e-08;198!UBERON:0002073;3.72e-07;5!UBERON:0002204;4.48e-07;70!UBERON:0003129;6.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.69e-15,41;UBERON:0007524,4.82e-15,73;UBERON:0002329,7.65e-15,71;UBERON:0003059,7.65e-15,71;UBERON:0007282,7.65e-15,71;UBERON:0004290,7.65e-15,71;UBERON:0009618,7.65e-15,71;UBERON:0003077,1.91e-14,72;UBERON:0007285,1.91e-14,72;UBERON:0007503,1.04e-13,78;UBERON:0000486,1.31e-13,83;UBERON:0002199,2.69e-13,46;UBERON:0002416,2.69e-13,46;UBERON:0003102,1.19e-12,99;UBERON:0000490,9.23e-11,148;UBERON:0002067,1.83e-10,9;UBERON:0004016,1.83e-10,9;UBERON:0010083,1.83e-10,9;UBERON:0005256,6.39e-10,122;UBERON:0003104,3.58e-09,160;UBERON:0009142,3.58e-09,160;UBERON:0001134,5.47e-09,62;UBERON:0002036,5.47e-09,62;UBERON:0003082,5.47e-09,62;UBERON:0002385,2.05e-08,64;UBERON:0001015,2.05e-08,64;UBERON:0000383,2.05e-08,64;UBERON:0001758,2.25e-08,6;UBERON:0003672,2.25e-08,6;UBERON:0002100,2.82e-07,199;UBERON:0002073,3.69e-07,5;UBERON:0005086,3.69e-07,5;UBERON:0003129,6.03e-07,7 | |||
|phase1_expression=0.181678379270557,3.21150785836475,0.845726424575827,5.00366491765652,1.34088328328186,0,0,1.26343974685366,0.522371256399677,2.94880723801811,1.39560233594486,0,0,1.48519623552056,0.994192127183747,0,1.20538905604795,0.730310090387373,0,0,3.4680117511523,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,3.67768489791571,10.5422071572388,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,9.03597880961416,11.0294340339896,4.34539556882471,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,0,19.7164735018656,1.92582629358047,0.835979866147242,0,0.71153252537342,0.66944122552934,0.402829317109147,0,0,2.94130464276695,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,1.51956613997496,2.1185468930115,6.02356903572509,2.4826786753885,0.560677600142307,0,0.74000264525148,0.622422070799533,1.48181739276657,0.817309515567294,0.151357427644931,0,11.2474287280222,11.2377627658915,7.41613368007784,3.73621701379503,12.8003603521704,10.6836143282967,11.9383185696911,18.7821837554502,21.1275025776241,6.81950155760052,10.6920257155385,21.0176889886773,39.1369385633351,21.5585442544872,16.6652752814526,15.6398149839955,54.0275025194157,53.9942473683431,31.874730763098,17.5778528920718,1.92834711372036,26.011497174885,2.34913127700424,2.11931901159562,7.20218630602566,1.33968288009971,10.8209026819164,4.28068769562657,15.3586462339552,3.02054715999716,5.04867548488229,1.01254888506529,1.93975268182574,14.2003837006646,5.64211750074785,3.73033303083073,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.414644220061482,0.504641701751257,0,28.1609158193669,21.8701918985581,20.7202382028721,22.754028473567,12.271951188383,0,0,0,0,0,0,0,0,0,0,15.426595118379,8.231480226628,2.94017422771084,0,0,2.36315962672562,0.441463099414651,0,0.514703430895577,0,0,0,0,13.6839488230336,11.4392826380754,0,0,0.469634776943287,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.447792613514241,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.616964956219941,0,0,2.91540819297938,0.87192013766656,1.3200891447771,0.129271715757778,14.3062578340753,3.381211010224,0,1.04007436911366,10.80270971901,36.8807743260523,12.2554202347406,3.14551586047925,0,1.64648067356154,2.28015329005615,2.48774364119782,0,0,0,0.099972991182057,0,0,0,1.19812427745791,2.29723871668228,7.13184525203592,18.9663511734529,4.72595541865882,22.203559441747,0,0,0,0,0,0,1.54657762555539,0.670065061337395,0,0,0,0,1.8403723757871,1.50051156317903,2.44138521329762,3.95144636908534,5.53129865271201,1.41932173530541,1.28855556491985,0.300946099727719,0,0,0,0.921845842708516,5.5605513259573,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0.492762936082855,1.03850885836724,1.39452454151951,0,0.40101294060657,0.0920809889358963,1.26295892981067,0.546273504020151,1.83574180943194,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,1.35473218771926,0,1.01950509218015,0,0.671624264166535,0,0,0.769350375349168,0,0,1.44257416306811,0,0.082509499920588,0,0,0,0,2.00263202249038,1.84204409671355,8.95937721149449,3.22260734604821,4.93056759308377,2.47157219506693,0,0.330569830721956,2.88285101047659,4.8492830747942,0.2023155617111,0.929691098594572,19.5183655034997,2.0911118104818,0,0.532306030317022,3.47973196830029,0,1.00187420719394,0.744316738719335,1.58189712359363,12.9628531868201,26.8692680876901,3.85145089230528,0,1.56989728039846,8.99362287916574,1.92175920815238,5.1837457032102,0.404364963146632,1.58510321173008,0.421258456238981,13.1661109554189,1.46228093778771,2.11300293513511,1.77449884830381,0.848432591722276,0,0,5.97095077717098,4.82295973779139,5.20897980840019,0.655894752046633,0,0.6196469961995,1.69017361519345,3.44187245289724,2.94747123039363,0,0,1.05553817648832,3.29294892959902,0,1.39973888097993,1.15466535270614,1.34060455107157,2.17781969722645,1.12972560932135,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,2.67140892054974,0,0,0.19924798825107,0,0,0,0,5.90975216557434,0,0,0,0.0986434056369336,0,10.0023291130173,0,0,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.923403102045565,0.683652335082007,9.91424788868659,4.39812457607883,12.3858003991089,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,1.85760885457012,3.66618086960175,0,0,0,0,0,0,0,0,0,1.18375320854817,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0,0,0,1.39294730528644,0.34945333648406,0,0,0,0,0,0,0.90392296312213,1.37041924646751,0.596143835108969,0,0,6.81349972138037,0,0,0,0,0,0,0,0,1.63085047288337,0.94142561681099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| ||
|short_description=p3@CCBE1 | |||
}} | }} |
Latest revision as of 01:37, 20 September 2015
Short description: | p3@CCBE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCBE1_5end |
Coexpression cluster: | C3733_Fibroblast_mesenchymal_bone_tridermal_myxofibrosarcoma_Hair_Myoblast |
Association with transcript: | -296bp_to_NM_133459, uc002lib.2_5end |
EntrezGene: | CCBE1 |
HGNC: | 29426 |
UniProt: | Q6UXH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.19e-27 | 76 |
skin fibroblast | 1.63e-19 | 23 |
muscle precursor cell | 2.83e-10 | 58 |
myoblast | 2.83e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.83e-10 | 58 |
muscle cell | 2.10e-08 | 55 |
fibroblast of periodontium | 2.25e-08 | 6 |
electrically responsive cell | 2.35e-07 | 61 |
electrically active cell | 2.35e-07 | 61 |
hair follicle cell | 3.69e-07 | 5 |
multi fate stem cell | 4.27e-07 | 427 |
fibroblast of dermis | 4.42e-07 | 6 |
mesodermal cell | 4.94e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.69e-15 | 41 |
dense mesenchyme tissue | 4.82e-15 | 73 |
somite | 7.65e-15 | 71 |
presomitic mesoderm | 7.65e-15 | 71 |
presumptive segmental plate | 7.65e-15 | 71 |
dermomyotome | 7.65e-15 | 71 |
trunk paraxial mesoderm | 7.65e-15 | 71 |
paraxial mesoderm | 1.91e-14 | 72 |
presumptive paraxial mesoderm | 1.91e-14 | 72 |
epithelial vesicle | 1.04e-13 | 78 |
multilaminar epithelium | 1.31e-13 | 83 |
integument | 2.69e-13 | 46 |
integumental system | 2.69e-13 | 46 |
surface structure | 1.19e-12 | 99 |
unilaminar epithelium | 9.23e-11 | 148 |
dermis | 1.83e-10 | 9 |
dermatome | 1.83e-10 | 9 |
future dermis | 1.83e-10 | 9 |
trunk mesenchyme | 6.39e-10 | 122 |
mesenchyme | 3.58e-09 | 160 |
entire embryonic mesenchyme | 3.58e-09 | 160 |
skeletal muscle tissue | 5.47e-09 | 62 |
striated muscle tissue | 5.47e-09 | 62 |
myotome | 5.47e-09 | 62 |
muscle tissue | 2.05e-08 | 64 |
musculature | 2.05e-08 | 64 |
musculature of body | 2.05e-08 | 64 |
periodontium | 2.25e-08 | 6 |
dentition | 2.25e-08 | 6 |
trunk | 2.82e-07 | 199 |
hair follicle | 3.69e-07 | 5 |
hair follicle placode | 3.69e-07 | 5 |
skull | 6.03e-07 | 7 |