FFCP PHASE1:Hg19::chr6:86352595..86352628,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:86352595..86352628,-
|short_description=p3@SYNCRIP
|description=CAGE_peak_3_at_SYNCRIP_5end
|association_with_transcript=0bp_to_NM_001159674,NM_001253771_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10492 | |EntrezGene=10492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16918 | |HGNC=16918 | ||
|TSSclassifier=strong | |||
|UniProt=O60506,Q59GL1 | |UniProt=O60506,Q59GL1 | ||
|association_with_transcript=0bp_to_NM_001159674,NM_001253771_5end | |||
|cluster_id=chr6:86352595..86352628,- | |||
|description=CAGE_peak_3_at_SYNCRIP_5end | |||
|id=chr6:86352595..86352628,- | |||
|ontology_enrichment_celltype=CL:0000012!1.01e-12!682;CL:0000548!1.61e-12!679;CL:0000004!1.61e-12!679;CL:0000255!1.61e-12!679;CL:0000057!3.36e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.20e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.16e-18!235;DOID:14566!1.26e-18!239;DOID:0050687!5.31e-11!143;DOID:305!2.36e-09!106;DOID:0050686!1.83e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.16e-18,235;DOID:14566,1.26e-18,239;DOID:0050687,5.31e-11,143;DOID:305,2.36e-09,106;DOID:0050686,1.83e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SYNCRIP | |||
}} | }} |
Latest revision as of 01:28, 20 September 2015
Short description: | p3@SYNCRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNCRIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001159674, NM_001253771_5end |
EntrezGene: | SYNCRIP |
HGNC: | 16918 |
UniProt: | O60506Q59GL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.20e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.16e-18 | 235 |
disease of cellular proliferation | 1.26e-18 | 239 |
cell type cancer | 5.31e-11 | 143 |
carcinoma | 2.36e-09 | 106 |
organ system cancer | 1.83e-08 | 137 |