FFCP PHASE1:Hg19::chr5:125801153..125801186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=309bp_to_ENST00000505441_5end | |association_with_transcript=309bp_to_ENST00000505441_5end | ||
|cluster_id=chr5:125801153..125801186,+ | |||
|description=CAGE_peak_15_at_GRAMD3_5end | |description=CAGE_peak_15_at_GRAMD3_5end | ||
|id=chr5:125801153..125801186,+ | |id=chr5:125801153..125801186,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.35e-18;3!CL:0002580;2.80e-18;3!CL:0002579;4.47e-18;3!CL:0002334;4.92e-17;12!CL:0000197;4.40e-16;6!CL:0000098;4.40e-16;6!CL:0002167;4.40e-16;6!CL:0002617;2.90e-13;2!CL:0000136;2.40e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.76e-18,3;CL:0002580,2.81e-18,3;CL:0002579,4.23e-18,3;CL:0002334,4.80e-17,12;CL:0000197,3.50e-16,6;CL:0000098,3.50e-16,6;CL:0002167,3.50e-16,6;CL:0002617,2.74e-13,2;CL:0000136,7.59e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.28e-12!115;UBERON:0001049!9.37e-12!57;UBERON:0005068!9.37e-12!57;UBERON:0006241!9.37e-12!57;UBERON:0007135!9.37e-12!57;UBERON:0002616!1.87e-11!59;UBERON:0003080!3.23e-10!42;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0000955!8.36e-09!69;UBERON:0006238!8.36e-09!69;UBERON:0005631!9.64e-09!14;UBERON:0000158!9.64e-09!14;UBERON:0002020!1.20e-08!34;UBERON:0003528!1.20e-08!34;UBERON:0001893!4.02e-08!34;UBERON:0001017!5.92e-08!82;UBERON:0002791!6.58e-08!33;UBERON:0001869!1.22e-07!32;UBERON:0005743!2.16e-07!86;UBERON:0003688!8.14e-07!6;UBERON:0002358!8.14e-07!6;UBERON:0003684!8.14e-07!6;UBERON:0001178!8.14e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!3.28e-12!115;UBERON:0001049!9.37e-12!57;UBERON:0005068!9.37e-12!57;UBERON:0006241!9.37e-12!57;UBERON:0007135!9.37e-12!57;UBERON:0002616!1.87e-11!59;UBERON:0003080!3.23e-10!42;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0000955!8.36e-09!69;UBERON:0006238!8.36e-09!69;UBERON:0005631!9.64e-09!14;UBERON:0000158!9.64e-09!14;UBERON:0002020!1.20e-08!34;UBERON:0003528!1.20e-08!34;UBERON:0001893!4.02e-08!34;UBERON:0001017!5.92e-08!82;UBERON:0002791!6.58e-08!33;UBERON:0001869!1.22e-07!32;UBERON:0005743!2.16e-07!86;UBERON:0003688!8.14e-07!6;UBERON:0002358!8.14e-07!6;UBERON:0003684!8.14e-07!6;UBERON:0001178!8.14e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.23e-34;6!UBERON:0002358;1.23e-34;6!UBERON:0003684;1.23e-34;6!UBERON:0001178;1.23e-34;6!UBERON:0004457;6.20e-23;9!UBERON:0000042;6.20e-23;9!UBERON:0000310;8.72e-15;10!UBERON:0001443;2.02e-13;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.77e-35,6;UBERON:0002358,8.77e-35,6;UBERON:0003684,8.77e-35,6;UBERON:0001178,8.77e-35,6;UBERON:0004457,3.83e-17,12;UBERON:0000042,3.83e-17,12;UBERON:0000310,8.49e-15,10;UBERON:0001443,1.97e-13,11;UBERON:0004923,1.84e-08,66 | |||
|phase1_expression=3.99692434395225,6.85121676451146,2.81908808191942,8.00586386825043,1.34088328328186,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.722878304769133,0,0.579386075843295,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,1.31693286264251,1.22595118319608,0.751190294532984,0,0.717558542755448,0.213557388818567,1.05965950579781,0.300091096084402,0.721367704669072,0.515281080091258,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0.0920498986422993,0.646584227275248,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,2.57296375277154,0,0.928735856063958,0,0.473227200159376,0.674338760312407,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,3.11956292296211,7.31558854068363,2.52323864054295,1.7571212248907,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,2.23297027036899,1.53461973288062,4.49056151092918,2.30650468660262,1.53512174720011,2.41280881715411,0,0,0,0.164254312027618,0,0,0.120859449591622,0.40101294060657,0.276242966807689,0.229628896329213,0.364182336013434,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.267096106940212,0,0.384380134730212,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0.571890581771475,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,1.9882952955326,0.562677665642051,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0,2.65722415744152,0.482385754501632,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.461701551022782,0.227884111694002,0,0.448788222048861,0.108647371922008,0.31900115973192,1.09917112082235,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0,0.995261931078505,0.353830258013357,0,0,0,0.104421949505455,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0.687944129886466,0.0967563312890851,0.146178634172371,0.0821154570532092,0.193978032976839,0.264768380074501,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0.169346664131569,0.795229689809303,1.0896272488926,0,0.137539436597234,0,0.899895566206002,0,0.242998226632099,0,0.0788057072991982,0,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0.439656701034247,1.32506888912221,0.258565912723101,0.79339561045614,0,0,0.213574825135389,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,3.90484047686282,0.500763722825999,2.86704597845036,0.776503360757966,0.24838561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| ||
|short_description=p15@GRAMD3 | |short_description=p15@GRAMD3 | ||
}} | }} |
Latest revision as of 01:19, 20 September 2015
Short description: | p15@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GRAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 309bp_to_ENST00000505441_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.76e-18 | 3 |
preadipocyte of the breast | 2.81e-18 | 3 |
omentum preadipocyte | 4.23e-18 | 3 |
preadipocyte | 4.80e-17 | 12 |
receptor cell | 3.50e-16 | 6 |
sensory epithelial cell | 3.50e-16 | 6 |
olfactory epithelial cell | 3.50e-16 | 6 |
adipocyte of breast | 2.74e-13 | 2 |
fat cell | 7.59e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.77e-35 | 6 |
peritoneum | 8.77e-35 | 6 |
abdominal cavity | 8.77e-35 | 6 |
visceral peritoneum | 8.77e-35 | 6 |
cavity lining | 3.83e-17 | 12 |
serous membrane | 3.83e-17 | 12 |
breast | 8.49e-15 | 10 |
chest | 1.97e-13 | 11 |
organ component layer | 1.84e-08 | 66 |