FFCP PHASE1:Hg19::chr22:36424458..36424486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23543 | |EntrezGene=23543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9906 | |HGNC=9906 | ||
|TSSclassifier=strong | |||
|UniProt=O43251 | |UniProt=O43251 | ||
|association_with_transcript=0bp_to_ENST00000438146_5end | |association_with_transcript=0bp_to_ENST00000438146_5end | ||
|cluster_id=chr22:36424458..36424486,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_12_at_RBFOX2_5end | |description=CAGE_peak_12_at_RBFOX2_5end | ||
|id=chr22:36424458..36424486,- | |id=chr22:36424458..36424486,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.02e-10;5!CL:0002321;7.78e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.29e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.03e-09!22;DOID:2994!1.03e-09!22 | |ontology_enrichment_disease=DOID:3095!1.03e-09!22;DOID:2994!1.03e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.19e-10;22!DOID:2994;2.19e-10;22!DOID:3307;1.13e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.01e-10,22;DOID:2994,2.01e-10,22;DOID:3307,6.02e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.56e-13!94;UBERON:0001016!3.56e-13!94;UBERON:0001017!9.66e-13!82;UBERON:0005743!1.45e-12!86;UBERON:0000924!6.84e-12!173;UBERON:0006601!6.84e-12!173;UBERON:0004121!1.29e-10!169;UBERON:0007023!1.81e-10!115;UBERON:0000955!4.00e-09!69;UBERON:0006238!4.00e-09!69;UBERON:0002616!5.77e-09!59;UBERON:0002346!8.33e-09!90;UBERON:0000468!2.64e-08!659;UBERON:0001049!9.21e-08!57;UBERON:0005068!9.21e-08!57;UBERON:0006241!9.21e-08!57;UBERON:0007135!9.21e-08!57;UBERON:0000119!9.88e-08!312;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0000483!1.92e-07!309;UBERON:0000475!1.99e-07!365;UBERON:0002780!9.59e-07!41;UBERON:0001890!9.59e-07!41;UBERON:0006240!9.59e-07!41 | |ontology_enrichment_uberon=UBERON:0000073!3.56e-13!94;UBERON:0001016!3.56e-13!94;UBERON:0001017!9.66e-13!82;UBERON:0005743!1.45e-12!86;UBERON:0000924!6.84e-12!173;UBERON:0006601!6.84e-12!173;UBERON:0004121!1.29e-10!169;UBERON:0007023!1.81e-10!115;UBERON:0000955!4.00e-09!69;UBERON:0006238!4.00e-09!69;UBERON:0002616!5.77e-09!59;UBERON:0002346!8.33e-09!90;UBERON:0000468!2.64e-08!659;UBERON:0001049!9.21e-08!57;UBERON:0005068!9.21e-08!57;UBERON:0006241!9.21e-08!57;UBERON:0007135!9.21e-08!57;UBERON:0000119!9.88e-08!312;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0000483!1.92e-07!309;UBERON:0000475!1.99e-07!365;UBERON:0002780!9.59e-07!41;UBERON:0001890!9.59e-07!41;UBERON:0006240!9.59e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.30e-14;49!UBERON:0005090;1.47e-07;2!UBERON:0001630;1.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.24e-07,2;UBERON:0001630,1.24e-07,2 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0,0,0.873765488520689,0,0.495065411840187,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0.30120591877825,0,0.309868802321207,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0,0.795285947051099,0,0.189069634328136,0,0.43917392846563,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.357198913136319,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0.269421344139376,0.163461903113459,0.908144565869588,1.15235184896,0.234321431833797,0,0.570471821544449,0.597794722207204,0.469737994575059,0.323745888736263,0.421352420106746,0.61246251376468,0.245668634623536,0.309977343527296,0,0,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.618315175430633,0,0,0.337552664482532,0.389748020644795,0.504867548488229,0.0920498986422993,0.646584227275248,0,0.503760491138201,0.339121184620975,0.193260853163297,0,0,0.487894824518382,1.32529768321485,1.04574548582567,1.24393266018445,1.00928340350251,1.09493207722749,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0,1.27047312111232,0,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0,1.48418066444991,0,1.06537035187876,0,0,0.116210378459959,0.483437798366489,0,0.184161977871793,0.229628896329213,0.910455840033585,1.18011973463482,0,0,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.183138929636687,0.247528499761764,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0.725083469571143,0.255679882248303,0.356128142586949,0,0,0,0.2023155617111,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0.424216295861138,1.13008116620243,1.10273068709225,0,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.196498082026242,0,1.06428319221179,0,0.658589785919804,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0.307160702099232,0.994147647766298,0.281338832821026,0.111308705022906,0,0.63337622438398,1.19548792950642,0.552567831062295,0.251932747854276,0.20453736500431,0,1.24415835064723,0,0,0,0.493217028184668,0,0,0,0.834912883456661,1.99613798001194,0,0.0874599999961957,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0.583209226766509,0,0.885741385813839,0.120596438625408,0,0.221158519862449,1.18219047581419,0.219385397153973,0,0.139423744278603,1.46205491157214,0,0.23056390438806,0.538545866458633,0.434589487688032,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0.104421949505455,0.808813595768125,2.40773294189637,0.937057782901357,0,0,0,0,0,0.30607276163049,3.09614240179591,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.569219092059585,0.554698692052555,0.694238953340524,0.195984794828755,0.174118413160805,0.698906672968121,0.343972064943233,0,0.0730893170861856,0,0.484945082442097,34.1551210296106,0.451961481561065,0,0.19871461170299,1.26621591911757,0,0.0801588202515337,0.640358984218058,0,0,0,0.343189995723929,0,0,0.235694034616795,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,1.20084057741958,0.136905378891993,0,0.859530882839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| ||
|short_description=p12@RBFOX2 | |short_description=p12@RBFOX2 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p12@RBFOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RBFOX2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000438146_5end |
EntrezGene: | RBFOX2 |
HGNC: | 9906 |
UniProt: | O43251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.29e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 1.24e-07 | 2 |
muscle organ | 1.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.01e-10 | 22 |
germ cell cancer | 2.01e-10 | 22 |
teratoma | 6.02e-08 | 2 |