FFCP PHASE1:Hg19::chr10:94833642..94833655,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1592 | |EntrezGene=1592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2603 | |HGNC=2603 | ||
|TSSclassifier=strong | |||
|UniProt=O43174,Q5VXH9 | |UniProt=O43174,Q5VXH9 | ||
|association_with_transcript=0bp_to_ENST00000224356,ENST00000394139,NM_000783,uc001kil.2_5end | |association_with_transcript=0bp_to_ENST00000224356,ENST00000394139,NM_000783,uc001kil.2_5end | ||
|cluster_id=chr10:94833642..94833655,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_1_at_CYP26A1_5end | |description=CAGE_peak_1_at_CYP26A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.42e-09!5 | |ontology_enrichment_celltype=CL:0002322!1.42e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.99e-25;5!CL:0002541;3.09e-15;3!CL:0000147;2.96e-08;14!CL:0002321;4.44e-08;15!CL:0000540;9.68e-08;6!CL:0000404;9.68e-08;6 | |ontology_enrichment_celltype_v019=CL:0002322;7.99e-25;5!CL:0002541;3.09e-15;3!CL:0000147;2.96e-08;14!CL:0002321;4.44e-08;15!CL:0000540;9.68e-08;6!CL:0000404;9.68e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.00e-25,5;CL:0002541,3.24e-15,3;CL:0000147,2.73e-08,14;CL:0000540,9.69e-08,6;CL:0000031,9.69e-08,6;CL:0000404,9.69e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.68e-08;6 | |ontology_enrichment_development_v019=CL:0000031;9.68e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.18e-08!11;UBERON:0003075!3.94e-08!86;UBERON:0007284!3.94e-08!86;UBERON:0003056!9.62e-08!61;UBERON:0002346!1.98e-07!90 | |ontology_enrichment_uberon=UBERON:0007625!2.18e-08!11;UBERON:0003075!3.94e-08!86;UBERON:0007284!3.94e-08!86;UBERON:0003056!9.62e-08!61;UBERON:0002346!1.98e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.09e-15;3!UBERON:0000920;3.09e-15;3!UBERON:0005631;7.31e-08;10!UBERON:0000158;7.31e-08;10!UBERON:0002369;2.28e-07;3!UBERON:0001235;2.28e-07;3!UBERON:0006858;2.28e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;3.09e-15;3!UBERON:0000920;3.09e-15;3!UBERON:0005631;7.31e-08;10!UBERON:0000158;7.31e-08;10!UBERON:0002369;2.28e-07;3!UBERON:0001235;2.28e-07;3!UBERON:0006858;2.28e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.24e-15,3;UBERON:0002369,2.25e-07,3;UBERON:0001235,2.25e-07,3;UBERON:0006858,2.25e-07,3;UBERON:0003124,9.11e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886917589850256,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,15.2467132661994,29.8191978723342,21.4958794308609,7.87824018116815,19.681026368299,29.1981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0.122988438543114,1.88724591328378,0,0,0,0,0,0,15.8764476227801,0.579652024875384,0.469634776943287,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,1.64007322849853,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.640944426764839,23.0995165263206,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82530504397664,0,0,3.34242278632766,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0,1.99613798001194,0,0,0,10.3552037939805,0.254253650292766,0,0,0,0,1.77148277162768,0,0,0,0.295547618953547,0,0,1.39423744278603,0.0769502585037971,0,0,0.179515288819544,1.84700532267414,25.2010916188216,2.10674464824283,13.8589041764845,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0.702793337176017,4.56136973039165,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,4.29363407483012,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,30.8646045052837,2.47570985875021,3.32352270423348,0,0,0.0607495566580247,9.39217125277945,0,0,0,0,0,0,0,12.204889807428,0,0,0,0,0,0,4.53248366080503,1.75862680413699,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3632220636221,0,0.226705925512272,0,0,0.358177682162975,25.3217186671997,1.53498834705095,0,0.964570191354574,0.168942440653073,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,2.01657356977374,0.138314504928436,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0.354581522651905,0,0.078493092850514,0,0,0,0,0,2.35872595782966,0,4.30093273862063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0.462175628631418,0,61.1907160450133,3.49649830283826,8.10870406473197,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.476128862927481,0.322944549180031,0.31037357147929,0,0,0.202117188958219,0,1.02669990325584,0.0673520530145875,0.502055437748735,0.99798106963804,0.162806537221949,0.106727345877715,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886917589850256,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,15.2467132661994,29.8191978723342,21.4958794308609,7.87824018116815,19.681026368299,29.1981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0.122988438543114,1.88724591328378,0,0,0,0,0,0,15.8764476227801,0.579652024875384,0.469634776943287,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,1.64007322849853,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.640944426764839,23.0995165263206,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82530504397664,0,0,3.34242278632766,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0,1.99613798001194,0,0,0,10.3552037939805,0.254253650292766,0,0,0,0,1.77148277162768,0,0,0,0.295547618953547,0,0,1.39423744278603,0.0769502585037971,0,0,0.179515288819544,1.84700532267414,25.2010916188216,2.10674464824283,13.8589041764845,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0.702793337176017,4.56136973039165,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,4.29363407483012,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,30.8646045052837,2.47570985875021,3.32352270423348,0,0,0.0607495566580247,9.39217125277945,0,0,0,0,0,0,0,12.204889807428,0,0,0,0,0,0,4.53248366080503,1.75862680413699,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3632220636221,0,0.226705925512272,0,0,0.358177682162975,25.3217186671997,1.53498834705095,0,0.964570191354574,0.168942440653073,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,2.01657356977374,0.138314504928436,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0.354581522651905,0,0.078493092850514,0,0,0,0,0,2.35872595782966,0,4.30093273862063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0.462175628631418,0,61.1907160450133,3.49649830283826,8.10870406473197,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.476128862927481,0.322944549180031,0.31037357147929,0,0,0.202117188958219,0,1.02669990325584,0.0673520530145875,0.502055437748735,0.99798106963804,0.162806537221949,0.106727345877715,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@CYP26A1 | |short_description=p1@CYP26A1 | ||
}} | }} |
Latest revision as of 01:07, 20 September 2015
Short description: | p1@CYP26A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP26A1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000224356, ENST00000394139, NM_000783, uc001kil.2_5end |
EntrezGene: | CYP26A1 |
HGNC: | 2603 |
UniProt: | O43174Q5VXH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.00e-25 | 5 |
chorionic membrane mesenchymal stem cell | 3.24e-15 | 3 |
pigment cell | 2.73e-08 | 14 |
neuron | 9.69e-08 | 6 |
neuroblast | 9.69e-08 | 6 |
electrically signaling cell | 9.69e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.24e-15 | 3 |
adrenal gland | 2.25e-07 | 3 |
adrenal cortex | 2.25e-07 | 3 |
adrenal/interrenal gland | 2.25e-07 | 3 |
chorion | 9.11e-07 | 7 |