FFCP PHASE1:Hg19::chr4:100063854..100063871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=127 | |EntrezGene=127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=252 | |HGNC=252 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_ENST00000503416_5end | |association_with_transcript=90bp_to_ENST00000503416_5end | ||
|cluster_id=chr4:100063854..100063871,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ADH4_5end | |description=CAGE_peak_3_at_ADH4_5end | ||
|id=chr4:100063854..100063871,- | |id=chr4:100063854..100063871,- | ||
|ontology_enrichment_celltype=CL:0000181!2.77e-24!12;CL:0000417!2.77e-24!12;CL:0000668!2.77e-24!12;CL:0000414!2.77e-24!12;CL:0000412!2.77e-24!12;CL:0000182!2.77e-24!12;CL:0000223!1.09e-07!59;CL:0002615!2.63e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.77e-24!12;CL:0000417!2.77e-24!12;CL:0000668!2.77e-24!12;CL:0000414!2.77e-24!12;CL:0000412!2.77e-24!12;CL:0000182!2.77e-24!12;CL:0000223!1.09e-07!59;CL:0002615!2.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.84e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.84e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.62e-24!19;UBERON:0006925!8.62e-24!19;UBERON:0008836!8.62e-24!19;UBERON:0008835!1.41e-20!22;UBERON:0003894!1.41e-20!22;UBERON:0009854!1.09e-19!23;UBERON:0007499!3.95e-18!25;UBERON:0009497!3.95e-18!25;UBERON:0000015!3.95e-18!25;UBERON:0002423!3.95e-18!25;UBERON:0006235!3.95e-18!25;UBERON:0004161!3.95e-18!25;UBERON:0005057!1.94e-17!26;UBERON:0009856!1.94e-17!26;UBERON:0002365!1.19e-14!31;UBERON:0002330!1.19e-14!31;UBERON:0002368!5.44e-13!35;UBERON:0003929!6.97e-12!54;UBERON:0002417!1.62e-10!61;UBERON:0000916!1.62e-10!61;UBERON:0000949!4.02e-10!45;UBERON:0004921!2.27e-08!129;UBERON:0004185!2.27e-08!129;UBERON:0005172!2.74e-08!55;UBERON:0005173!2.74e-08!55;UBERON:0005911!9.15e-08!82;UBERON:0002530!9.97e-08!59;UBERON:0001007!7.06e-07!155;UBERON:0001555!7.06e-07!155;UBERON:0007026!7.06e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-19;19!UBERON:0006925;1.91e-19;19!UBERON:0002423;5.33e-15;25!UBERON:0002365;1.21e-12;31!UBERON:0002330;1.21e-12;31!UBERON:0002368;1.05e-09;33!UBERON:0000949;1.98e-08;43!UBERON:0005172;7.14e-07;52!UBERON:0005173;7.14e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-19,19;UBERON:0006925,1.91e-19,19;UBERON:0008836,1.91e-19,19;UBERON:0008835,6.38e-17,22;UBERON:0003894,6.38e-17,22;UBERON:0009854,3.17e-16,23;UBERON:0007499,5.33e-15,25;UBERON:0009497,5.33e-15,25;UBERON:0000015,5.33e-15,25;UBERON:0002423,5.33e-15,25;UBERON:0006235,5.33e-15,25;UBERON:0004161,5.33e-15,25;UBERON:0009856,1.86e-14,26;UBERON:0002365,2.90e-12,31;UBERON:0002330,2.90e-12,31;UBERON:0002368,5.87e-11,35;UBERON:0000949,1.07e-08,45;UBERON:0003929,2.27e-07,54;UBERON:0005172,2.27e-07,54;UBERON:0005173,2.27e-07,54;UBERON:0002530,8.33e-07,59 | |||
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|short_description=p3@ADH4 | |short_description=p3@ADH4 | ||
}} | }} |
Latest revision as of 00:57, 20 September 2015
Short description: | p3@ADH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADH4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 90bp_to_ENST00000503416_5end |
EntrezGene: | ADH4 |
HGNC: | 252 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.84e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-19 | 19 |
digestive gland | 1.91e-19 | 19 |
liver bud | 1.91e-19 | 19 |
hepatic diverticulum | 6.38e-17 | 22 |
liver primordium | 6.38e-17 | 22 |
digestive tract diverticulum | 3.17e-16 | 23 |
epithelial sac | 5.33e-15 | 25 |
epithelium of foregut-midgut junction | 5.33e-15 | 25 |
anatomical boundary | 5.33e-15 | 25 |
hepatobiliary system | 5.33e-15 | 25 |
foregut-midgut junction | 5.33e-15 | 25 |
septum transversum | 5.33e-15 | 25 |
sac | 1.86e-14 | 26 |
exocrine gland | 2.90e-12 | 31 |
exocrine system | 2.90e-12 | 31 |
endocrine gland | 5.87e-11 | 35 |
endocrine system | 1.07e-08 | 45 |
gut epithelium | 2.27e-07 | 54 |
abdomen element | 2.27e-07 | 54 |
abdominal segment element | 2.27e-07 | 54 |
gland | 8.33e-07 | 59 |