FFCP PHASE1:Hg19::chr6:116692102..116692118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29940 | |EntrezGene=29940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21144 | |HGNC=21144 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL01 | |UniProt=Q9UL01 | ||
|association_with_transcript=0bp_to_ENST00000359564,NM_013352,uc003pwt.2_5end | |association_with_transcript=0bp_to_ENST00000359564,NM_013352,uc003pwt.2_5end | ||
|cluster_id=chr6:116692102..116692118,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_DSE_5end | |description=CAGE_peak_1_at_DSE_5end | ||
|id=chr6:116692102..116692118,+ | |id=chr6:116692102..116692118,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.17e-20!42;CL:0002009!1.21e-18!65;CL:0000766!2.06e-18!76;CL:0002194!9.42e-18!63;CL:0000576!9.42e-18!63;CL:0000040!9.42e-18!63;CL:0000559!9.42e-18!63;CL:0000860!1.19e-16!45;CL:0000557!1.53e-15!71;CL:0000723!1.65e-13!436;CL:0000144!1.77e-13!625;CL:0000839!2.84e-13!70;CL:0000034!2.85e-13!444;CL:0000048!4.21e-13!430;CL:0002371!1.31e-12!591;CL:0000134!1.13e-09!358;CL:0002320!2.61e-09!365;CL:0000012!4.51e-08!682;CL:0000548!6.67e-08!679;CL:0000004!6.67e-08!679;CL:0000255!6.67e-08!679;CL:0000055!2.15e-07!180 | |ontology_enrichment_celltype=CL:0002057!1.17e-20!42;CL:0002009!1.21e-18!65;CL:0000766!2.06e-18!76;CL:0002194!9.42e-18!63;CL:0000576!9.42e-18!63;CL:0000040!9.42e-18!63;CL:0000559!9.42e-18!63;CL:0000860!1.19e-16!45;CL:0000557!1.53e-15!71;CL:0000723!1.65e-13!436;CL:0000144!1.77e-13!625;CL:0000839!2.84e-13!70;CL:0000034!2.85e-13!444;CL:0000048!4.21e-13!430;CL:0002371!1.31e-12!591;CL:0000134!1.13e-09!358;CL:0002320!2.61e-09!365;CL:0000012!4.51e-08!682;CL:0000548!6.67e-08!679;CL:0000004!6.67e-08!679;CL:0000255!6.67e-08!679;CL:0000055!2.15e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.83e-19;33!CL:0002057;5.83e-19;33!CL:0000473;4.00e-17;39!CL:0000234;4.00e-17;39!CL:0000576;2.01e-11;48!CL:0000766;2.79e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.06e-22,48;CL:0000234,3.06e-22,48;CL:0002009,2.82e-21,61;CL:0000766,9.76e-21,72;CL:0000860,1.13e-20,42;CL:0002057,1.13e-20,42;CL:0002194,2.36e-20,59;CL:0000576,2.36e-20,59;CL:0000040,2.36e-20,59;CL:0000559,2.36e-20,59;CL:0000557,1.07e-17,67;CL:0000839,3.46e-15,66;CL:0000723,5.95e-15,433;CL:0000034,1.07e-14,441;CL:0000048,1.71e-14,427;CL:0000134,8.71e-11,354;CL:0002320,2.15e-10,361;CL:0000057,8.57e-07,76;CL:0000763,9.68e-07,108;CL:0000049,9.68e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.97e-19!167;UBERON:0002371!5.37e-14!80;UBERON:0004765!9.15e-14!101;UBERON:0001434!9.15e-14!101;UBERON:0002390!5.74e-13!102;UBERON:0003061!5.74e-13!102;UBERON:0001474!9.80e-13!86;UBERON:0003081!6.85e-11!216;UBERON:0002193!2.42e-10!112;UBERON:0002384!1.29e-09!375;UBERON:0000926!7.61e-09!448;UBERON:0004120!7.61e-09!448;UBERON:0006603!7.61e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.58e-20,167;UBERON:0000926,1.50e-16,315;UBERON:0004120,1.50e-16,315;UBERON:0006603,1.50e-16,315;UBERON:0002371,7.90e-16,76;UBERON:0004765,4.94e-15,90;UBERON:0001434,6.16e-15,100;UBERON:0002390,2.02e-14,98;UBERON:0003061,2.02e-14,98;UBERON:0001474,2.39e-14,82;UBERON:0003081,7.18e-12,203;UBERON:0002193,1.65e-11,108;UBERON:0002384,1.03e-10,371;UBERON:0002405,1.39e-10,93 | |||
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| ||
|short_description=p1@DSE | |short_description=p1@DSE | ||
}} | }} |
Latest revision as of 00:56, 20 September 2015
Short description: | p1@DSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DSE_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000359564, NM_013352, uc003pwt.2_5end |
EntrezGene: | DSE |
HGNC: | 21144 |
UniProt: | Q9UL01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.06e-22 | 48 |
phagocyte | 3.06e-22 | 48 |
macrophage dendritic cell progenitor | 2.82e-21 | 61 |
myeloid leukocyte | 9.76e-21 | 72 |
classical monocyte | 1.13e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-20 | 42 |
monopoietic cell | 2.36e-20 | 59 |
monocyte | 2.36e-20 | 59 |
monoblast | 2.36e-20 | 59 |
promonocyte | 2.36e-20 | 59 |
granulocyte monocyte progenitor cell | 1.07e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.46e-15 | 66 |
somatic stem cell | 5.95e-15 | 433 |
stem cell | 1.07e-14 | 441 |
multi fate stem cell | 1.71e-14 | 427 |
mesenchymal cell | 8.71e-11 | 354 |
connective tissue cell | 2.15e-10 | 361 |
fibroblast | 8.57e-07 | 76 |
myeloid cell | 9.68e-07 | 108 |
common myeloid progenitor | 9.68e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.58e-20 | 167 |
mesoderm | 1.50e-16 | 315 |
mesoderm-derived structure | 1.50e-16 | 315 |
presumptive mesoderm | 1.50e-16 | 315 |
bone marrow | 7.90e-16 | 76 |
skeletal element | 4.94e-15 | 90 |
skeletal system | 6.16e-15 | 100 |
hematopoietic system | 2.02e-14 | 98 |
blood island | 2.02e-14 | 98 |
bone element | 2.39e-14 | 82 |
lateral plate mesoderm | 7.18e-12 | 203 |
hemolymphoid system | 1.65e-11 | 108 |
connective tissue | 1.03e-10 | 371 |
immune system | 1.39e-10 | 93 |