FFCP PHASE1:Hg19::chr3:99980167..99980181,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25622 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=259bp_to_ENST00000486274_5end | |||
|cluster_id=chr3:99980167..99980181,+ | |||
|coexpression_cluster_id=C3976 | |||
|description=CAGE_peak_5_at_TBC1D23_5end | |||
|id=chr3:99980167..99980181,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.15e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.64e-29;7!CL:0000586;5.64e-29;7!CL:0002166;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.64e-29,7;CL:0000586,5.64e-29,7;CL:0002166,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.57e-20;10!UBERON:0005564;1.57e-20;10 | |||
|ontology_enrichment_disease=DOID:305!7.26e-09!106;DOID:1749!5.72e-08!14;DOID:0050687!5.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.34e-23;1!DOID:4549;1.34e-23;1!DOID:5861;1.34e-23;1!DOID:6496;1.34e-23;1!DOID:0050619;2.34e-23;1!DOID:1357;2.34e-23;1!DOID:3095;2.03e-16;22!DOID:2994;2.03e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.34e-23,1;DOID:4549,1.34e-23,1;DOID:5861,1.34e-23,1;DOID:6496,1.34e-23,1;DOID:0050619,2.10e-23,1;DOID:1357,2.10e-23,1;DOID:3095,2.08e-16,22;DOID:2994,2.08e-16,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.85e-25;8!UBERON:0001764;2.34e-23;1!UBERON:0001825;2.34e-23;1!UBERON:0003135;9.78e-19;11!UBERON:0000991;3.80e-10;21!UBERON:0003101;1.03e-09;22!UBERON:0000079;1.03e-09;22!UBERON:0002418;8.96e-09;3!UBERON:0004755;8.96e-09;3!UBERON:0001708;9.36e-07;4!UBERON:0008895;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.85e-25,8;UBERON:0001764,2.10e-23,1;UBERON:0001825,2.10e-23,1;UBERON:0003135,9.78e-19,11;UBERON:0000991,3.80e-10,21;UBERON:0009196,3.80e-10,21;UBERON:0009117,3.80e-10,21;UBERON:0005564,3.80e-10,21;UBERON:0004176,1.03e-09,22;UBERON:0003101,1.03e-09,22;UBERON:0000079,1.03e-09,22;UBERON:0002418,8.96e-09,3;UBERON:0004755,8.96e-09,3;UBERON:0003133,9.05e-08,48;UBERON:0001708,8.61e-07,4;UBERON:0008895,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.243947412259191,0.530119073285941,0.348581828608555,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.329250856225877,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.708875486211932,0.268675568108545,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0.335643173951685,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0.174118413160805,0,0,0,0,0,0.0969890164884194,6.44269724847952,0,0,0,0.0633107959558787,0,0,0,0.799238438328521,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.13480708770837,0,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,2.51286554000375,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.530067437837643,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0.11294608203896,0.109940516745429,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,1.42045243552804,0.126698501011437,0.815910637935854,7.48208734743569,1.47031839255752,2.50707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TBC1D23 | |||
}} |
Latest revision as of 00:52, 20 September 2015
Short description: | p5@TBC1D23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBC1D23_5end |
Coexpression cluster: | C3976_testicular_extraskeletal_cervical_maxillary_teratocarcinoma_iPS_H9 |
Association with transcript: | 259bp_to_ENST00000486274_5end |
EntrezGene: | TBC1D23 |
HGNC: | 25622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.64e-29 | 7 |
germ cell | 5.64e-29 | 7 |
epithelial cell of Malassez | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.85e-25 | 8 |
maxillary sinus | 2.10e-23 | 1 |
paranasal sinus | 2.10e-23 | 1 |
male reproductive organ | 9.78e-19 | 11 |
gonad | 3.80e-10 | 21 |
indifferent external genitalia | 3.80e-10 | 21 |
indifferent gonad | 3.80e-10 | 21 |
gonad primordium | 3.80e-10 | 21 |
external genitalia | 1.03e-09 | 22 |
male organism | 1.03e-09 | 22 |
male reproductive system | 1.03e-09 | 22 |
cartilage tissue | 8.96e-09 | 3 |
skeletal tissue | 8.96e-09 | 3 |
reproductive organ | 9.05e-08 | 48 |
jaw skeleton | 8.61e-07 | 4 |
splanchnocranium | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.34e-23 | 1 |
extraosseous chondrosarcoma | 1.34e-23 | 1 |
myxoid chondrosarcoma | 1.34e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.34e-23 | 1 |
paranasal sinus cancer | 2.10e-23 | 1 |
maxillary sinus cancer | 2.10e-23 | 1 |
germ cell and embryonal cancer | 2.08e-16 | 22 |
germ cell cancer | 2.08e-16 | 22 |