FFCP PHASE1:Hg19::chrX:153046493..153046497,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26576 | |EntrezGene=26576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11402 | |HGNC=11402 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPE1,A8MPY5 | |UniProt=Q9UPE1,A8MPY5 | ||
|association_with_transcript=0bp_to_ENST00000370101,ENST00000370104,ENST00000370108_5end | |association_with_transcript=0bp_to_ENST00000370101,ENST00000370104,ENST00000370108_5end | ||
|cluster_id=chrX:153046493..153046497,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_SRPK3_5end | |description=CAGE_peak_1_at_SRPK3_5end | ||
|id=chrX:153046493..153046497,+ | |id=chrX:153046493..153046497,+ | ||
|ontology_enrichment_celltype=CL:0000188!7.47e-07!9 | |ontology_enrichment_celltype=CL:0000188!7.47e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.23e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.05e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.22e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.13e-43!115;UBERON:0001049!3.06e-19!57;UBERON:0005068!3.06e-19!57;UBERON:0006241!3.06e-19!57;UBERON:0007135!3.06e-19!57;UBERON:0000955!1.44e-16!69;UBERON:0006238!1.44e-16!69;UBERON:0005743!7.98e-16!86;UBERON:0002616!7.99e-16!59;UBERON:0001017!1.16e-15!82;UBERON:0000073!5.40e-15!94;UBERON:0001016!5.40e-15!94;UBERON:0003075!1.31e-13!86;UBERON:0007284!1.31e-13!86;UBERON:0000475!1.71e-13!365;UBERON:0002780!2.25e-13!41;UBERON:0001890!2.25e-13!41;UBERON:0006240!2.25e-13!41;UBERON:0003080!7.95e-13!42;UBERON:0002346!2.48e-12!90;UBERON:0000153!4.50e-11!129;UBERON:0007811!4.50e-11!129;UBERON:0000483!5.44e-11!309;UBERON:0000119!6.34e-11!312;UBERON:0000481!2.83e-10!347;UBERON:0004121!5.14e-10!169;UBERON:0000033!5.76e-10!123;UBERON:0001893!7.99e-10!34;UBERON:0002020!1.01e-09!34;UBERON:0003528!1.01e-09!34;UBERON:0002791!2.23e-09!33;UBERON:0000924!2.41e-09!173;UBERON:0006601!2.41e-09!173;UBERON:0001869!1.47e-08!32;UBERON:0000025!4.24e-08!194;UBERON:0003056!6.18e-08!61;UBERON:0003076!6.68e-08!15;UBERON:0003057!6.68e-08!15;UBERON:0004732!5.27e-07!13;UBERON:0002308!8.76e-07!9;UBERON:0000125!8.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.85e-21;16!UBERON:0002036;3.85e-21;16!UBERON:0002385;4.25e-13;31!UBERON:0001015;4.25e-13;31!UBERON:0000383;4.25e-13;31!UBERON:0003296;5.91e-10;4!UBERON:0010133;5.91e-10;4!UBERON:0003978;1.14e-08;3!UBERON:0004151;1.14e-08;3!UBERON:0000946;1.14e-08;3!UBERON:0007023;4.98e-08;114!UBERON:0007100;4.25e-07;25!UBERON:0005090;7.35e-07;2!UBERON:0001630;7.35e-07;2!UBERON:0000341;9.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.60e-27,114;UBERON:0003296,4.94e-10,4;UBERON:0010133,4.94e-10,4;UBERON:0004151,1.11e-08,3;UBERON:0003978,1.23e-08,3;UBERON:0009751,1.23e-08,3;UBERON:0000946,1.23e-08,3;UBERON:0002523,1.23e-08,3;UBERON:0005983,1.23e-08,3;UBERON:0002165,1.23e-08,3;UBERON:0002062,1.23e-08,3;UBERON:0007280,1.23e-08,3;UBERON:0005090,7.37e-07,2;UBERON:0001630,7.37e-07,2;UBERON:0000341,9.67e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0.772921620136887,0.37223371266318,1.35021065793013,0.389748020644795,0,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3504355692771,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,2.17171960001369,0.410952645100767,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,15.0983106476777,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0,0,0,0,0,0,0,0,0.524497659837696,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.812839312631559,2.00675909541941,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,1.46511143709349,1.89771849817352,0,0,0,3.963499449977,0.462145851343933,2.76306614507033,2.48105830472155,0.214840489736547,1.59518363305651,3.49429172406014,23.4154253750919,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,1.79128453917934,0,0.318203247925937,0,2.15846949099978,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0,0.430234056612155,0.589494246078727,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,4.18420775327246,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0.511572370226872,1.87422470710174,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,7.58435421131222,0,0,0.885741385813839,0.241192877250816,1.52581736317083,8.40402375477307,2.36438095162838,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0.995261931078505,0.530745387020035,0,0,0,0,1.01101699471016,30.497950597354,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,3.4945333648406,0.51595809741485,0,0,0,1.16386819786103,0,3.84167259326905,0,0,0.696418755514666,0.391102765469606,0.240476460754601,1.70762395791482,0,0,0,1.88754497648161,0.576219191952599,0,0,0.543616824294456,1.46443984837266,0,0.288950589901519,1.20084057741958,1.9166753044879,0,0,0,3.0721064139948,9.62473780849071,4.30723814746088,8.78587602195561,21.032076358692,14.9524876486055,9.74160351057531,0.360299883542404,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,5.71756261098694,4.63464379255802,0,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,0.904980694530854,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0.610131324509816,0.500763722825999,0,1.10929051536852,0.807253238237985,0,0.124980407962107,0.303298235083296,0,0,0.936669811613763,5.21715702998971,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,0,4.00027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.788617450012533,21.6154102037077,0,0.3062454773532,0.321146125482298,1.41696576325585,1.11743701340006,0.615349092722265,0,1.1756732918917,0.484426936895553,2.85538840518309,0,0,0,0,0.381382095467167,0,1.98916222116275,0.451261970095544,0,0,0,0,0.739280431085226,0.405225507710368,0,0.826747186004736,0.443910671357348,0,0.548257766857182,15.8787577084574,0,0,2.67850917939143,2.01770233331294,2.42786241694653,1.82129753081038,0.0887023701626388,0,0,0.543757863814654,0.72350050919134,0,0,2.04082041411336,0.157115589916002,2.5224494698241,1.82631744101899,0,0,0.78624198594322,0,0,4.17259853526191,0,0,0,0,1.72090943528111,0,0.0852134047591577,0,0,0,0,0,0,0,58.9160241840984,70.5293483102417,85.8262679190267,5.82853191670967,0,10.3454403083911,0,0,1.64910775118144,0.754814217833368,0.385870790539723,0.437119121007915,18.8126918544609,3.43207650455468,0,0.392616934229891,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,2.75237570042724,1.72007499781742,0,0.475940431336403,0,0,0,0.924351257262837,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0.378893491091197,0,0.829169439458779,0.827463966895162,17.4851865158804,23.5683787149103,0.0645889098360061,0.186224142887574,0,0.318235791390825,2.22328907854041,18.7236403191387,39.3568296248073,1.34704106029175,0.573777643141411,4.9899053481902,0,0,0,0,4.69281884806909,1.58913877437726,0.406896178315738,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0.772921620136887,0.37223371266318,1.35021065793013,0.389748020644795,0,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3504355692771,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,2.17171960001369,0.410952645100767,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,15.0983106476777,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0,0,0,0,0,0,0,0,0.524497659837696,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.812839312631559,2.00675909541941,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,1.46511143709349,1.89771849817352,0,0,0,3.963499449977,0.462145851343933,2.76306614507033,2.48105830472155,0.214840489736547,1.59518363305651,3.49429172406014,23.4154253750919,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,1.79128453917934,0,0.318203247925937,0,2.15846949099978,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0,0.430234056612155,0.589494246078727,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,4.18420775327246,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0.511572370226872,1.87422470710174,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,7.58435421131222,0,0,0.885741385813839,0.241192877250816,1.52581736317083,8.40402375477307,2.36438095162838,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0.995261931078505,0.530745387020035,0,0,0,0,1.01101699471016,30.497950597354,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,3.4945333648406,0.51595809741485,0,0,0,1.16386819786103,0,3.84167259326905,0,0,0.696418755514666,0.391102765469606,0.240476460754601,1.70762395791482,0,0,0,1.88754497648161,0.576219191952599,0,0,0.543616824294456,1.46443984837266,0,0.288950589901519,1.20084057741958,1.9166753044879,0,0,0,3.0721064139948,9.62473780849071,4.30723814746088,8.78587602195561,21.032076358692,14.9524876486055,9.74160351057531,0.360299883542404,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,5.71756261098694,4.63464379255802,0,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,0.904980694530854,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0.610131324509816,0.500763722825999,0,1.10929051536852,0.807253238237985,0,0.124980407962107,0.303298235083296,0,0,0.936669811613763,5.21715702998971,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,0,4.00027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.788617450012533,21.6154102037077,0,0.3062454773532,0.321146125482298,1.41696576325585,1.11743701340006,0.615349092722265,0,1.1756732918917,0.484426936895553,2.85538840518309,0,0,0,0,0.381382095467167,0,1.98916222116275,0.451261970095544,0,0,0,0,0.739280431085226,0.405225507710368,0,0.826747186004736,0.443910671357348,0,0.548257766857182,15.8787577084574,0,0,2.67850917939143,2.01770233331294,2.42786241694653,1.82129753081038,0.0887023701626388,0,0,0.543757863814654,0.72350050919134,0,0,2.04082041411336,0.157115589916002,2.5224494698241,1.82631744101899,0,0,0.78624198594322,0,0,4.17259853526191,0,0,0,0,1.72090943528111,0,0.0852134047591577,0,0,0,0,0,0,0,58.9160241840984,70.5293483102417,85.8262679190267,5.82853191670967,0,10.3454403083911,0,0,1.64910775118144,0.754814217833368,0.385870790539723,0.437119121007915,18.8126918544609,3.43207650455468,0,0.392616934229891,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,2.75237570042724,1.72007499781742,0,0.475940431336403,0,0,0,0.924351257262837,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0.378893491091197,0,0.829169439458779,0.827463966895162,17.4851865158804,23.5683787149103,0.0645889098360061,0.186224142887574,0,0.318235791390825,2.22328907854041,18.7236403191387,39.3568296248073,1.34704106029175,0.573777643141411,4.9899053481902,0,0,0,0,4.69281884806909,1.58913877437726,0.406896178315738,0,0.805095174364105,0 | ||
|short_description=p1@SRPK3 | |short_description=p1@SRPK3 | ||
}} | }} |
Latest revision as of 00:52, 20 September 2015
Short description: | p1@SRPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRPK3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000370101, ENST00000370104, ENST00000370108_5end |
EntrezGene: | SRPK3 |
HGNC: | 11402 |
UniProt: | Q9UPE1A8MPY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.05e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.60e-27 | 114 |
gland of diencephalon | 4.94e-10 | 4 |
neuroendocrine gland | 4.94e-10 | 4 |
cardiac chamber | 1.11e-08 | 3 |
valve | 1.23e-08 | 3 |
cardiac mesenchyme | 1.23e-08 | 3 |
cardial valve | 1.23e-08 | 3 |
tunica intima | 1.23e-08 | 3 |
heart layer | 1.23e-08 | 3 |
endocardium | 1.23e-08 | 3 |
endocardial cushion | 1.23e-08 | 3 |
presumptive endocardium | 1.23e-08 | 3 |
muscle structure | 7.37e-07 | 2 |
muscle organ | 7.37e-07 | 2 |
throat | 9.67e-07 | 2 |