FFCP PHASE1:Hg19::chr12:6716054..6716102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1108 | |EntrezGene=1108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1919 | |HGNC=1919 | ||
|TSSclassifier=strong | |||
|UniProt=F5H596 | |UniProt=F5H596 | ||
|association_with_transcript=-208bp_to_ENST00000545584_5end | |association_with_transcript=-208bp_to_ENST00000545584_5end | ||
|cluster_id=chr12:6716054..6716102,- | |||
|description=CAGE_peak_11_at_CHD4_5end | |description=CAGE_peak_11_at_CHD4_5end | ||
|id=chr12:6716054..6716102,- | |id=chr12:6716054..6716102,- | ||
|ontology_enrichment_celltype=CL:0002322;2.43e-17;5!CL:0002321;2.08e-13;15!CL:0000064;6.77e-11;3!CL:0000067;6.77e-11;3!CL:0005012;6.77e-11;3!CL:0002304;6.77e-11;3!CL:0002575;1.81e-07;2!CL:0000075;6.66e-07;27 | |ontology_enrichment_celltype=CL:0000133!8.59e-09!59;CL:0002319!1.82e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;2.43e-17;5!CL:0002321;2.08e-13;15!CL:0000064;6.77e-11;3!CL:0000067;6.77e-11;3!CL:0005012;6.77e-11;3!CL:0002304;6.77e-11;3!CL:0002575;1.81e-07;2!CL:0000075;6.66e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.02e-17,5;CL:0000064,2.34e-11,3;CL:0000067,2.34e-11,3;CL:0005012,2.34e-11,3;CL:0002304,2.34e-11,3;CL:0002575,5.59e-08,2;CL:0000075,3.85e-07,27;CL:0000047,5.63e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000488;8.81e-14;4!UBERON:0001778;6.77e-11;3!UBERON:0001775;6.77e-11;3!UBERON:0007625;1.25e-10;11!UBERON:0002203;3.34e-09;6!UBERON:0001768;3.34e-09;6!UBERON:0002200;3.34e-09;6!UBERON:0001801;3.35e-08;14 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.29e-16!94;UBERON:0001016!3.29e-16!94;UBERON:0001017!2.87e-15!82;UBERON:0005743!1.01e-14!86;UBERON:0002346!2.96e-13!90;UBERON:0003075!5.01e-12!86;UBERON:0007284!5.01e-12!86;UBERON:0000955!3.27e-11!69;UBERON:0006238!3.27e-11!69;UBERON:0000924!1.25e-10!173;UBERON:0006601!1.25e-10!173;UBERON:0001049!2.26e-10!57;UBERON:0005068!2.26e-10!57;UBERON:0006241!2.26e-10!57;UBERON:0007135!2.26e-10!57;UBERON:0002616!9.40e-10!59;UBERON:0004121!1.15e-09!169;UBERON:0003056!1.56e-08!61;UBERON:0002020!2.87e-08!34;UBERON:0003528!2.87e-08!34;UBERON:0001893!4.87e-08!34;UBERON:0002791!6.36e-08!33;UBERON:0002780!1.42e-07!41;UBERON:0001890!1.42e-07!41;UBERON:0006240!1.42e-07!41;UBERON:0000153!1.83e-07!129;UBERON:0007811!1.83e-07!129;UBERON:0001869!2.73e-07!32;UBERON:0003080!3.73e-07!42;UBERON:0000033!4.34e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;8.81e-14;4!UBERON:0001778;6.77e-11;3!UBERON:0001775;6.77e-11;3!UBERON:0007625;1.25e-10;11!UBERON:0002203;3.34e-09;6!UBERON:0001768;3.34e-09;6!UBERON:0002200;3.34e-09;6!UBERON:0001801;3.35e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,5.60e-14,4;UBERON:0001778,2.34e-11,3;UBERON:0001775,2.34e-11,3;UBERON:0007625,7.60e-11,11;UBERON:0002203,2.49e-09,6;UBERON:0001768,2.49e-09,6;UBERON:0002200,2.49e-09,6;UBERON:0001801,2.29e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0.85870796139317,0.821246550437305,0.251085279189606,0.534893840235659,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,2.64342657158052,0,0.526768169550154,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0,0.434539556882471,0,0,3.59232305223458,1.55210578223795,1.93236528524877,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,0,0,0,0,0,1.70763188581434,2.12047629314376,1.74290914304278,2.07322110030741,2.77552935963191,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,1.02940686179115,0.109750285408626,0,0,0,0,0,0,1.73895607462615,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,0,0.102827492703324,0,0,1.23344192779897,3.05172048183296,0.5867062865676,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0,0.410952645100767,0,0,0.394061520403854,0.431255149719035,0.128343036279748,1.77866236955724,0,0,0.670065061337395,0.637938751653163,0,0,0.828831026872071,0.858840442033979,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,0.473107245101804,0.234282829985426,0,2.27407504055985,0,0,0,0.0868836144680828,1.95801157462741,1.71571711905428,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,1.00726411300178,0.82509499920588,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.870100163485371,0.0852266274161009,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0,0.190630193923825,0,1.28381696410176,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.961416640147258,0,0,0,0.721346064882224,0.569134746787313,0.318852545457645,0,0,0.423347165447766,0,0,0.684704037099577,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0.540911356951966,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,2.32237948940793,0.19924798825107,0.276283915531148,1.51159648712566,0.511343412510774,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.868124974666461,1.77148277162768,0.60298219312704,0,0.331737779793674,0,0.438770794307945,0,0,0.307801034015188,0.341826167541004,0,0.179515288819544,0,0,0.0915975934018623,0,1.02193298195737,0,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0,0,0.485560759068186,0.789168805698781,0,0.30607276163049,0.252746318513952,0,0.72581733978073,0,0.330991955875499,0.313932918407225,1.19472429772959,1.13843818411917,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0.193978032976839,0.264768380074501,0.677942222341597,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0.72045208577053,0,0.514784993585894,0,0.99402028452346,0,0.271808412147228,0.732219924186332,0.203996435272644,0.577901179803038,1.20084057741958,0.958337652243951,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.335917362433631,0,0,0.945398187686684,0.412079291905832,0.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| ||
|short_description=p11@CHD4 | |short_description=p11@CHD4 | ||
}} | }} |
Latest revision as of 00:49, 20 September 2015
Short description: | p11@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CHD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_ENST00000545584_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | F5H596 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.02e-17 | 5 |
ciliated cell | 2.34e-11 | 3 |
ciliated epithelial cell | 2.34e-11 | 3 |
multi-ciliated epithelial cell | 2.34e-11 | 3 |
non-pigmented ciliary epithelial cell | 2.34e-11 | 3 |
central nervous system pericyte | 5.59e-08 | 2 |
columnar/cuboidal epithelial cell | 3.85e-07 | 27 |
neuronal stem cell | 5.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 5.60e-14 | 4 |
ciliary epithelium | 2.34e-11 | 3 |
ciliary body | 2.34e-11 | 3 |
pigment epithelium of eye | 7.60e-11 | 11 |
vasculature of eye | 2.49e-09 | 6 |
uvea | 2.49e-09 | 6 |
vasculature of head | 2.49e-09 | 6 |
anterior segment of eyeball | 2.29e-08 | 14 |