FFCP PHASE1:Hg19::chr7:92463234..92463293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1021 | |EntrezGene=1021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1777 | |HGNC=1777 | ||
|TSSclassifier=strong | |||
|UniProt=Q00534,A4D1G0 | |UniProt=Q00534,A4D1G0 | ||
|association_with_transcript=-3bp_to_ENST00000265734,NM_001259,uc011khw.1_5end | |association_with_transcript=-3bp_to_ENST00000265734,NM_001259,uc011khw.1_5end | ||
|cluster_id=chr7:92463234..92463293,- | |||
|coexpression_cluster_id=C2905 | |||
|description=CAGE_peak_2_at_CDK6_5end | |description=CAGE_peak_2_at_CDK6_5end | ||
|id=chr7:92463234..92463293,- | |id=chr7:92463234..92463293,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.51e-13!235;DOID:2531!1.52e-12!51;DOID:0060083!1.52e-12!51;DOID:14566!2.00e-12!239;DOID:1240!4.39e-09!39;DOID:0050686!1.32e-08!137 | |ontology_enrichment_disease=DOID:162!2.51e-13!235;DOID:2531!1.52e-12!51;DOID:0060083!1.52e-12!51;DOID:14566!2.00e-12!239;DOID:1240!4.39e-09!39;DOID:0050686!1.32e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.54e-07;51!DOID:0060083;1.54e-07;51!DOID:1240;4.73e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.15e-13,235;DOID:2531,1.52e-12,51;DOID:0060083,1.52e-12,51;DOID:14566,1.72e-12,239;DOID:1240,4.38e-09,39;DOID:0050686,1.25e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-11!82;UBERON:0000955!9.04e-11!69;UBERON:0006238!9.04e-11!69;UBERON:0000073!2.78e-10!94;UBERON:0001016!2.78e-10!94;UBERON:0005743!3.27e-10!86;UBERON:0001049!5.73e-10!57;UBERON:0005068!5.73e-10!57;UBERON:0006241!5.73e-10!57;UBERON:0007135!5.73e-10!57;UBERON:0002616!2.90e-09!59;UBERON:0002780!3.78e-09!41;UBERON:0001890!3.78e-09!41;UBERON:0006240!3.78e-09!41;UBERON:0003080!8.49e-09!42;UBERON:0000153!8.79e-08!129;UBERON:0007811!8.79e-08!129;UBERON:0001893!9.06e-08!34;UBERON:0002020!1.65e-07!34;UBERON:0003528!1.65e-07!34;UBERON:0003075!1.70e-07!86;UBERON:0007284!1.70e-07!86;UBERON:0002791!1.78e-07!33;UBERON:0001869!5.83e-07!32;UBERON:0000033!8.33e-07!123 | |ontology_enrichment_uberon=UBERON:0001017!2.08e-11!82;UBERON:0000955!9.04e-11!69;UBERON:0006238!9.04e-11!69;UBERON:0000073!2.78e-10!94;UBERON:0001016!2.78e-10!94;UBERON:0005743!3.27e-10!86;UBERON:0001049!5.73e-10!57;UBERON:0005068!5.73e-10!57;UBERON:0006241!5.73e-10!57;UBERON:0007135!5.73e-10!57;UBERON:0002616!2.90e-09!59;UBERON:0002780!3.78e-09!41;UBERON:0001890!3.78e-09!41;UBERON:0006240!3.78e-09!41;UBERON:0003080!8.49e-09!42;UBERON:0000153!8.79e-08!129;UBERON:0007811!8.79e-08!129;UBERON:0001893!9.06e-08!34;UBERON:0002020!1.65e-07!34;UBERON:0003528!1.65e-07!34;UBERON:0003075!1.70e-07!86;UBERON:0007284!1.70e-07!86;UBERON:0002791!1.78e-07!33;UBERON:0001869!5.83e-07!32;UBERON:0000033!8.33e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.13e-07;34!UBERON:0002780;5.69e-07;41!UBERON:0001890;5.69e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.74e-12,223;UBERON:0001016,1.11e-11,89;UBERON:0001017,1.13e-11,81;UBERON:0000955,4.67e-11,68;UBERON:0006238,4.67e-11,68;UBERON:0001049,2.79e-10,56;UBERON:0005068,2.79e-10,56;UBERON:0006241,2.79e-10,56;UBERON:0007135,2.79e-10,56;UBERON:0000073,1.05e-09,53;UBERON:0002616,1.05e-09,53;UBERON:0002780,3.77e-09,41;UBERON:0001890,3.77e-09,41;UBERON:0003080,3.77e-09,41;UBERON:0006240,3.77e-09,41;UBERON:0001893,9.05e-08,34;UBERON:0003075,1.27e-07,82;UBERON:0007284,1.27e-07,82;UBERON:0003528,1.65e-07,34;UBERON:0002020,1.65e-07,34;UBERON:0002791,4.67e-07,32;UBERON:0001869,5.82e-07,32;UBERON:0003056,7.34e-07,61 | |||
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| ||
|short_description=p2@CDK6 | |short_description=p2@CDK6 | ||
}} | }} |
Latest revision as of 00:42, 20 September 2015
Short description: | p2@CDK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK6_5end |
Coexpression cluster: | C2905_granulocyte_lymphoma_acute_Hodgkin_CD34_CD133_neuroblastoma |
Association with transcript: | -3bp_to_ENST00000265734, NM_001259, uc011khw.1_5end |
EntrezGene: | CDK6 |
HGNC: | 1777 |
UniProt: | Q00534A4D1G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.74e-12 | 223 |
nervous system | 1.11e-11 | 89 |
central nervous system | 1.13e-11 | 81 |
brain | 4.67e-11 | 68 |
future brain | 4.67e-11 | 68 |
neural tube | 2.79e-10 | 56 |
neural rod | 2.79e-10 | 56 |
future spinal cord | 2.79e-10 | 56 |
neural keel | 2.79e-10 | 56 |
regional part of nervous system | 1.05e-09 | 53 |
regional part of brain | 1.05e-09 | 53 |
regional part of forebrain | 3.77e-09 | 41 |
forebrain | 3.77e-09 | 41 |
anterior neural tube | 3.77e-09 | 41 |
future forebrain | 3.77e-09 | 41 |
telencephalon | 9.05e-08 | 34 |
neural plate | 1.27e-07 | 82 |
presumptive neural plate | 1.27e-07 | 82 |
brain grey matter | 1.65e-07 | 34 |
gray matter | 1.65e-07 | 34 |
regional part of telencephalon | 4.67e-07 | 32 |
cerebral hemisphere | 5.82e-07 | 32 |
pre-chordal neural plate | 7.34e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.15e-13 | 235 |
hematologic cancer | 1.52e-12 | 51 |
immune system cancer | 1.52e-12 | 51 |
disease of cellular proliferation | 1.72e-12 | 239 |
leukemia | 4.38e-09 | 39 |
organ system cancer | 1.25e-08 | 137 |